Literature DB >> 15797915

MADE4: an R package for multivariate analysis of gene expression data.

Aedín C Culhane1, Jean Thioulouse, Guy Perrière, Desmond G Higgins.   

Abstract

SUMMARY: MADE4, microarray ade4, is a software package that facilitates multivariate analysis of microarray gene-expression data. MADE4 accepts a wide variety of gene-expression data formats. MADE4 takes advantage of the extensive multivariate statistical and graphical functions in the R package ade4, extending these for application to microarray data. In addition, MADE4 provides new graphical and visualization tools that aid in interpretation of multivariate analysis of microarray data.

Entities:  

Mesh：

Year:  2005        PMID： 15797915     DOI： 10.1093/bioinformatics/bti394

Source DB:  PubMed          Journal:  Bioinformatics        ISSN： 1367-4803            Impact factor:   6.937


  148 in total

1.  Influence of Wastewater Discharge on the Metabolic Potential of the Microbial Community in River Sediments.

Authors:  Dong Li; Jonathan O Sharp; Jörg E Drewes
Journal:  Microb Ecol       Date:  2015-09-24       Impact factor: 4.552

2.  Non-adaptive plasticity potentiates rapid adaptive evolution of gene expression in nature.

Authors:  Cameron K Ghalambor; Kim L Hoke; Emily W Ruell; Eva K Fischer; David N Reznick; Kimberly A Hughes
Journal:  Nature       Date:  2015-09-02       Impact factor: 49.962

3.  Human CD19-Targeted Mouse T Cells Induce B Cell Aplasia and Toxicity in Human CD19 Transgenic Mice.

Authors:  Christopher A Pennell; Jessie L Barnum; Cameron S McDonald-Hyman; Angela Panoskaltsis-Mortari; Megan J Riddle; Zhengming Xiong; Michael Loschi; Govindarajan Thangavelu; Heather M Campbell; Meghan D Storlie; Yosef Refaeli; Scott N Furlan; Michael C Jensen; Leslie S Kean; Jeffrey S Miller; Jakub Tolar; Mark J Osborn; Bruce R Blazar
Journal:  Mol Ther       Date:  2018-04-07       Impact factor: 11.454

Review 4.  Platelet genomics and proteomics in human health and disease.

Authors:  Iain C Macaulay; Philippa Carr; Arief Gusnanto; Willem H Ouwehand; Des Fitzgerald; Nicholas A Watkins
Journal:  J Clin Invest       Date:  2005-12       Impact factor: 14.808

5.  Application of a high-density oligonucleotide microarray approach to study bacterial population dynamics during uranium reduction and reoxidation.

Authors:  Eoin L Brodie; Todd Z Desantis; Dominique C Joyner; Seung M Baek; Joern T Larsen; Gary L Andersen; Terry C Hazen; Paul M Richardson; Donald J Herman; Tetsu K Tokunaga; Jiamin M Wan; Mary K Firestone
Journal:  Appl Environ Microbiol       Date:  2006-09       Impact factor: 4.792

6.  EBI3 regulates the NK cell response to mouse cytomegalovirus infection.

Authors:  Helle Jensen; Shih-Yu Chen; Lasse Folkersen; Garry P Nolan; Lewis L Lanier
Journal:  Proc Natl Acad Sci U S A       Date:  2017-01-31       Impact factor: 11.205

7.  Temporal transcriptomic microarray analysis of "Dehalococcoides ethenogenes" strain 195 during the transition into stationary phase.

Authors:  David R Johnson; Eoin L Brodie; Alan E Hubbard; Gary L Andersen; Stephen H Zinder; Lisa Alvarez-Cohen
Journal:  Appl Environ Microbiol       Date:  2008-02-29       Impact factor: 4.792

8.  The novel ER membrane protein PRO41 is essential for sexual development in the filamentous fungus Sordaria macrospora.

Authors:  Minou Nowrousian; Sandra Frank; Sandra Koers; Peter Strauch; Thomas Weitner; Carol Ringelberg; Jay C Dunlap; Jennifer J Loros; Ulrich Kück
Journal:  Mol Microbiol       Date:  2007-05       Impact factor: 3.501

9.  A Mouse Brain-based Multi-omics Integrative Approach Reveals Potential Blood Biomarkers for Ischemic Stroke.

Authors:  Alba Simats; Laura Ramiro; Teresa García-Berrocoso; Ferran Briansó; Ricardo Gonzalo; Luna Martín; Anna Sabé; Natalia Gill; Anna Penalba; Nuria Colomé; Alex Sánchez; Francesc Canals; Alejandro Bustamante; Anna Rosell; Joan Montaner
Journal:  Mol Cell Proteomics       Date:  2020-08-31       Impact factor: 5.911

10.  Taxonomy of breast cancer based on normal cell phenotype predicts outcome.

Authors:  Sandro Santagata; Ankita Thakkar; Ayse Ergonul; Bin Wang; Terri Woo; Rong Hu; J Chuck Harrell; George McNamara; Matthew Schwede; Aedin C Culhane; David Kindelberger; Scott Rodig; Andrea Richardson; Stuart J Schnitt; Rulla M Tamimi; Tan A Ince
Journal:  J Clin Invest       Date:  2014-01-27       Impact factor: 14.808
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.