Literature DB >> 15793585

Insights into hRPA32 C-terminal domain--mediated assembly of the simian virus 40 replisome.

Alphonse I Arunkumar1, Vitaly Klimovich, Xiaohua Jiang, Robert D Ott, L Mizoue, Ellen Fanning, Walter J Chazin.   

Abstract

Simian virus 40 (SV40) provides a model system for the study of eukaryotic DNA replication, in which the viral protein, large T antigen (Tag), marshals human proteins to replicate the viral minichromosome. SV40 replication requires interaction of Tag with the host single-stranded DNA-binding protein, replication protein A (hRPA). The C-terminal domain of the hRPA32 subunit (RPA32C) facilitates initiation of replication, but whether it interacts with Tag is not known. Affinity chromatography and NMR revealed physical interaction between hRPA32C and the Tag origin DNA-binding domain, and a structural model of the complex was determined. Point mutations were then designed to reverse charges in the binding sites, resulting in substantially reduced binding affinity. Corresponding mutations introduced into intact hRPA impaired initiation of replication and primosome activity, implying that this interaction has a critical role in assembly and progression of the SV40 replisome.

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Year:  2005        PMID: 15793585      PMCID: PMC2600586          DOI: 10.1038/nsmb916

Source DB:  PubMed          Journal:  Nat Struct Mol Biol        ISSN: 1545-9985            Impact factor:   15.369


  48 in total

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Authors:  S Waga; B Stillman
Journal:  Annu Rev Biochem       Date:  1998       Impact factor: 23.643

2.  Crystallography & NMR system: A new software suite for macromolecular structure determination.

Authors:  A T Brünger; P D Adams; G M Clore; W L DeLano; P Gros; R W Grosse-Kunstleve; J S Jiang; J Kuszewski; M Nilges; N S Pannu; R J Read; L M Rice; T Simonson; G L Warren
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1998-09-01

Review 3.  Replication protein A: a heterotrimeric, single-stranded DNA-binding protein required for eukaryotic DNA metabolism.

Authors:  M S Wold
Journal:  Annu Rev Biochem       Date:  1997       Impact factor: 23.643

4.  Role of protein-protein interactions in the function of replication protein A (RPA): RPA modulates the activity of DNA polymerase alpha by multiple mechanisms.

Authors:  K A Braun; Y Lao; Z He; C J Ingles; M S Wold
Journal:  Biochemistry       Date:  1997-07-15       Impact factor: 3.162

Review 5.  The initiation of simian virus 40 DNA replication in vitro.

Authors:  P A Bullock
Journal:  Crit Rev Biochem Mol Biol       Date:  1997       Impact factor: 8.250

6.  Attenuated T2 relaxation by mutual cancellation of dipole-dipole coupling and chemical shift anisotropy indicates an avenue to NMR structures of very large biological macromolecules in solution.

Authors:  K Pervushin; R Riek; G Wider; K Wüthrich
Journal:  Proc Natl Acad Sci U S A       Date:  1997-11-11       Impact factor: 11.205

Review 7.  Replication protein A (RPA): the eukaryotic SSB.

Authors:  C Iftode; Y Daniely; J A Borowiec
Journal:  Crit Rev Biochem Mol Biol       Date:  1999       Impact factor: 8.250

8.  DNA-binding polarity of human replication protein A positions nucleases in nucleotide excision repair.

Authors:  W L de Laat; E Appeldoorn; K Sugasawa; E Weterings; N G Jaspers; J H Hoeijmakers
Journal:  Genes Dev       Date:  1998-08-15       Impact factor: 11.361

9.  Stoichiometry and mechanism of assembly of SV40 T antigen complexes with the viral origin of DNA replication and DNA polymerase alpha-primase.

Authors:  S G Huang; K Weisshart; I Gilbert; E Fanning
Journal:  Biochemistry       Date:  1998-11-03       Impact factor: 3.162

10.  The replication protein A binding site in simian virus 40 (SV40) T antigen and its role in the initial steps of SV40 DNA replication.

Authors:  K Weisshart; P Taneja; E Fanning
Journal:  J Virol       Date:  1998-12       Impact factor: 5.103

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  49 in total

1.  Structural basis for the interaction of a hexameric replicative helicase with the regulatory subunit of human DNA polymerase α-primase.

Authors:  Bo Zhou; Diana R Arnett; Xian Yu; Aaron Brewster; Gregory A Sowd; Charlies L Xie; Stefan Vila; Dahai Gai; Ellen Fanning; Xiaojiang S Chen
Journal:  J Biol Chem       Date:  2012-06-14       Impact factor: 5.157

2.  Insights into eukaryotic DNA priming from the structure and functional interactions of the 4Fe-4S cluster domain of human DNA primase.

Authors:  Sivaraja Vaithiyalingam; Eric M Warren; Brandt F Eichman; Walter J Chazin
Journal:  Proc Natl Acad Sci U S A       Date:  2010-07-19       Impact factor: 11.205

3.  Structure of a DNA polymerase alpha-primase domain that docks on the SV40 helicase and activates the viral primosome.

Authors:  Hao Huang; Brian E Weiner; Haijiang Zhang; Brian E Fuller; Yue Gao; Brian M Wile; Kun Zhao; Diana R Arnett; Walter J Chazin; Ellen Fanning
Journal:  J Biol Chem       Date:  2010-03-16       Impact factor: 5.157

4.  Structural mechanism of RPA loading on DNA during activation of a simple pre-replication complex.

Authors:  Xiaohua Jiang; Vitaly Klimovich; Alphonse I Arunkumar; Erik B Hysinger; Yingda Wang; Robert D Ott; Gulfem D Guler; Brian Weiner; Walter J Chazin; Ellen Fanning
Journal:  EMBO J       Date:  2006-11-16       Impact factor: 11.598

5.  Different activities of the largest subunit of replication protein A cooperate during SV40 DNA replication.

Authors:  Poonam Taneja; Irene Boche; Hella Hartmann; Heinz-Peter Nasheuer; Frank Grosse; Ellen Fanning; Klaus Weisshart
Journal:  FEBS Lett       Date:  2007-07-25       Impact factor: 4.124

6.  Crystal structure of the simian virus 40 large T-antigen origin-binding domain.

Authors:  Gretchen Meinke; Peter A Bullock; Andrew Bohm
Journal:  J Virol       Date:  2006-05       Impact factor: 5.103

7.  Crystal structure of SV40 large T-antigen bound to p53: interplay between a viral oncoprotein and a cellular tumor suppressor.

Authors:  Wayne Lilyestrom; Michael G Klein; Rongguang Zhang; Andrzej Joachimiak; Xiaojiang S Chen
Journal:  Genes Dev       Date:  2006-09-01       Impact factor: 11.361

8.  Analyses of the interaction between the origin binding domain from simian virus 40 T antigen and single-stranded DNA provide insights into DNA unwinding and initiation of DNA replication.

Authors:  Danielle K Reese; Gretchen Meinke; Anuradha Kumar; Stephanie Moine; Kathleen Chen; James L Sudmeier; William Bachovchin; Andrew Bohm; Peter A Bullock
Journal:  J Virol       Date:  2006-09-27       Impact factor: 5.103

9.  Functional dynamics in replication protein A DNA binding and protein recruitment domains.

Authors:  Chris A Brosey; Sarah E Soss; Sonja Brooks; Chunli Yan; Ivaylo Ivanov; Kavita Dorai; Walter J Chazin
Journal:  Structure       Date:  2015-05-21       Impact factor: 5.006

10.  Tying up the Ends: Plasticity in the Recognition of Single-Stranded DNA at Telomeres.

Authors:  Neil R Lloyd; Thayne H Dickey; Robert A Hom; Deborah S Wuttke
Journal:  Biochemistry       Date:  2016-09-15       Impact factor: 3.162

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