Literature DB >> 15785856

On slippage-like mutation dynamics within genes: a study of pseudogenes and 3'UTRs.

Manami Nishizawa1, Kazuhisa Nishizawa.   

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Year:  2005        PMID： 15785856     DOI： 10.1007/s00239-004-0109-5

Source DB:  PubMed          Journal:  J Mol Evol        ISSN： 0022-2844            Impact factor:   2.395


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  5 in total

1.  Models of sequence evolution for DNA sequences containing gaps.

Authors:  G McGuire; M C Denham; D J Balding
Journal:  Mol Biol Evol       Date:  2001-04       Impact factor: 16.240

2.  Comprehensive analysis of amino acid and nucleotide composition in eukaryotic genomes, comparing genes and pseudogenes.

Authors:  Nathaniel Echols; Paul Harrison; Suganthi Balasubramanian; Nicholas M Luscombe; Paul Bertone; Zhaolei Zhang; Mark Gerstein
Journal:  Nucleic Acids Res       Date:  2002-06-01       Impact factor: 16.971

3.  A DNA sequence evolution analysis generalized by simulation and the markov chain monte carlo method implicates strand slippage in a majority of insertions and deletions.

Authors:  Manami Nishizawa; Kazuhisa Nishizawa
Journal:  J Mol Evol       Date:  2002-12       Impact factor: 2.395

Review 4.  Comparative analysis of processed pseudogenes in the mouse and human genomes.

Authors:  Zhaolei Zhang; Nick Carriero; Mark Gerstein
Journal:  Trends Genet       Date:  2004-02       Impact factor: 11.639

5.  A new method that simultaneously aligns and reconstructs ancestral sequences for any number of homologous sequences, when the phylogeny is given.

Authors:  J Hein
Journal:  Mol Biol Evol       Date:  1989-11       Impact factor: 16.240
  5 in total
  1 in total

1.  The origin, evolution, and functional impact of short insertion-deletion variants identified in 179 human genomes.

Authors:  Stephen B Montgomery; David L Goode; Erika Kvikstad; Cornelis A Albers; Zhengdong D Zhang; Xinmeng Jasmine Mu; Guruprasad Ananda; Bryan Howie; Konrad J Karczewski; Kevin S Smith; Vanessa Anaya; Rhea Richardson; Joe Davis; Daniel G MacArthur; Arend Sidow; Laurent Duret; Mark Gerstein; Kateryna D Makova; Jonathan Marchini; Gil McVean; Gerton Lunter
Journal:  Genome Res       Date:  2013-03-11       Impact factor: 9.043
  1 in total

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