Literature DB >> 15767017

Molecular profiling of Bacteroides spp. in human feces by PCR-temperature gradient gel electrophoresis.

Xiaoyan Pang1, Dezhong Ding, Guifang Wei, Meiling Zhang, Linghua Wang, Liping Zhao.   

Abstract

A group-specific PCR-based temperature gradient gel electrophoresis (TGGE) method was developed to study the population composition of genus Bacteroides in human gut. Highly reproducible and well-separated bands in TGGE fingerprints of ten unrelated human fecal samples showed complex and host-specific Bacteroides species composition. Dynamic monitoring over 22 months of samples from one healthy 10-year-old boy indicated a relatively stable population profile of Bacteroides. The species identity of each band in TGGE gel of this boy was also resolved via comigration analysis of sequenced inserts in a Bacteroides group-specific clone library. This work provides a rapid and effective technique for analyzing the species composition of Bacteroides in human gut.

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Year:  2005        PMID: 15767017     DOI: 10.1016/j.mimet.2004.12.012

Source DB:  PubMed          Journal:  J Microbiol Methods        ISSN: 0167-7012            Impact factor:   2.363


  9 in total

1.  Gut bacteria alteration in obese people and its relationship with gene polymorphism.

Authors:  Hao-Jiang Zuo; Zhi-Mei Xie; Wei-Wei Zhang; Yong-Ru Li; Wei Wang; Xiao-Bei Ding; Xiao-Fang Pei
Journal:  World J Gastroenterol       Date:  2011-02-28       Impact factor: 5.742

2.  PCR-DGGE-based study of fecal microbial stability during the long-term chitosan supplementation of humans.

Authors:  J Mrázek; I Koppová; J Kopecný; J Simůnek; K Fliegerová
Journal:  Folia Microbiol (Praha)       Date:  2010-08-03       Impact factor: 2.099

3.  Molecular profiling of the Clostridium leptum subgroup in human fecal microflora by PCR-denaturing gradient gel electrophoresis and clone library analysis.

Authors:  Jian Shen; Baorang Zhang; Guifang Wei; Xiaoyan Pang; Hua Wei; Min Li; Yan Zhang; Wei Jia; Liping Zhao
Journal:  Appl Environ Microbiol       Date:  2006-08       Impact factor: 4.792

4.  The development and stability of the genus Bacteriodes from human gut microbiota in HFA mice model.

Authors:  Jing Yuan; Benhua Zeng; Rong Niu; Huan Tang; Wenxia Li; Zhixue Zhang; Hong Wei
Journal:  Curr Microbiol       Date:  2010-12-05       Impact factor: 2.188

5.  Structural shifts of mucosa-associated lactobacilli and Clostridium leptum subgroup in patients with ulcerative colitis.

Authors:  Meiling Zhang; Bianying Liu; Yan Zhang; Hua Wei; Yufeng Lei; Liping Zhao
Journal:  J Clin Microbiol       Date:  2006-12-06       Impact factor: 5.948

6.  Symbiotic gut microbes modulate human metabolic phenotypes.

Authors:  Min Li; Baohong Wang; Menghui Zhang; Mattias Rantalainen; Shengyue Wang; Haokui Zhou; Yan Zhang; Jian Shen; Xiaoyan Pang; Meiling Zhang; Hua Wei; Yu Chen; Haifeng Lu; Jian Zuo; Mingming Su; Yunping Qiu; Wei Jia; Chaoni Xiao; Leon M Smith; Shengli Yang; Elaine Holmes; Huiru Tang; Guoping Zhao; Jeremy K Nicholson; Lanjuan Li; Liping Zhao
Journal:  Proc Natl Acad Sci U S A       Date:  2008-02-05       Impact factor: 11.205

7.  A Pilot Study of the Effect of Lactobacillus casei Obtained from Long-Lived Elderly on Blood Biochemical, Oxidative, and Inflammatory Markers, and on Gut Microbiota in Young Volunteers.

Authors:  Li-Hua Mei; Wen-Xuan Zheng; Zheng-Tao Zhao; Ning Meng; Qin-Ren Zhang; Wen-Jun Zhu; Rui-Ding Li; Xiao-Lin Liang; Quan-Yang Li
Journal:  Nutrients       Date:  2021-10-29       Impact factor: 5.717

8.  Application of sequence-dependent electrophoresis fingerprinting in exploring biodiversity and population dynamics of human intestinal microbiota: what can be revealed?

Authors:  Geert Huys; Tom Vanhoutte; Peter Vandamme
Journal:  Interdiscip Perspect Infect Dis       Date:  2008-12-14

9.  Distribution, detection of enterotoxigenic strains and antimicrobial drug susceptibility patterns of bacteroides fragilis group in diarrheic and non-diarrheic feces from brazilian infants.

Authors:  Débora Paula Ferreira; Vânia Lúcia Silva; Danielle Aparecida Guimarães; Cíntia Marques Coelho; Danielle Alves Gomes Zauli; Luiz Macêdo Farias; Maria Auxiliadora Roque Carvalho; Claudio Galuppo Diniz
Journal:  Braz J Microbiol       Date:  2010-09-01       Impact factor: 2.476

  9 in total

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