Literature DB >> 15757172

Fungal genetic resource centres and the genomic challenge.

Matthew J Ryan1, David Smith.   

Abstract

Fungal research and education has for many years been supported by public service genetic resource centres, whose roles have been to maintain, preserve and supply living cultures to the research community. In the genomic era, genetic resource centres are perhaps more important than ever before. The cultures held, many of which are described and validated by expert biosystematists, are valuable resources for the future. There is a need to supply genomic and proteomic research programmes with fully characterised organisms, as usage of organisms from unreliable sources can prove disastrous, not least in economical terms. However, mycologists often require more than just the organisms, for example, their associated information is vital for bioinformatic applications and some researchers may only require genomic DNA from the organism rather than the organism per se. Genetic resource centres are continually adapting to meet the needs of their users and the wider mycological research community, this associated with OECD international initiatives should ensure they exist to support research for many years to come. This review considers the impact of such initiatives, the current roles of fungal genetic resource centres, the mechanisms used to preserve organisms in a stable manner and the range of resources that are offered for genomic research.

Mesh:

Year:  2004        PMID: 15757172     DOI: 10.1017/s0953756204001650

Source DB:  PubMed          Journal:  Mycol Res        ISSN: 0953-7562


  7 in total

1.  Rediscovering Zygorhizidium affluens Canter: Molecular Taxonomy, Infectious Cycle, and Cryopreservation of a Chytrid Infecting the Bloom-Forming Diatom Asterionella formosa.

Authors:  Cecilia Rad-Menéndez; Mélanie Gerphagnon; Andrea Garvetto; Paola Arce; Yacine Badis; Télesphore Sime-Ngando; Claire M M Gachon
Journal:  Appl Environ Microbiol       Date:  2018-11-15       Impact factor: 4.792

2.  Cryopreservation of ectomycorrhizal fungi has minor effects on root colonization of Pinus sylvestris plantlets and their subsequent nutrient uptake capacity.

Authors:  Charlotte Crahay; Jan Wevers; Françoise Munaut; Jan V Colpaert; Stéphane Declerck
Journal:  Mycorrhiza       Date:  2013-03-02       Impact factor: 3.387

Review 3.  Implementing best practices and validation of cryopreservation techniques for microorganisms.

Authors:  David Smith; Matthew Ryan
Journal:  ScientificWorldJournal       Date:  2012-05-02

4.  Does Osmotic Stress Affect Natural Product Expression in Fungi?

Authors:  David Overy; Hebelin Correa; Catherine Roullier; Wei-Chiung Chi; Ka-Lai Pang; Mostafa Rateb; Rainer Ebel; Zhuo Shang; Rob Capon; Gerald Bills; Russell Kerr
Journal:  Mar Drugs       Date:  2017-08-13       Impact factor: 5.118

5.  A handy method to remove bacterial contamination from fungal cultures.

Authors:  Xiao-Xiao Shi; Hai-Ping Qiu; Jiao-Yu Wang; Zhen Zhang; Yan-Li Wang; Guo-Chang Sun
Journal:  PLoS One       Date:  2019-11-06       Impact factor: 3.240

6.  Identification of Penicillium species by MALDI-TOF MS analysis of spores collected by dielectrophoresis.

Authors:  Michael A Reeve; Denise Bachmann; Thelma S Caine
Journal:  Biol Methods Protoc       Date:  2019-11-29

Review 7.  Preserving US microbe collections sparks future discoveries.

Authors:  K Boundy-Mills; K McCluskey; P Elia; J A Glaeser; D L Lindner; D R Nobles; J Normanly; F M Ochoa-Corona; J A Scott; T J Ward; K M Webb; K Webster; J E Wertz
Journal:  J Appl Microbiol       Date:  2019-12-12       Impact factor: 3.772

  7 in total

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