Literature DB >> 15755455

The crystal structure of human PAPS synthetase 1 reveals asymmetry in substrate binding.

Stefan Harjes1, Peter Bayer, Axel J Scheidig.   

Abstract

The high energy sulfate donor 3'-phosphoadenosine-5-phosphosulfate (PAPS) is used for sulfate conjugation of extracellular matrix, hormones and drugs. Human PAPS synthetase 1 catalyzes two subsequent reactions starting from ATP and sulfate. First the ATP sulfurylase domain forms APS, then the APS kinase domain phosphorylates the APS intermediate to PAPS. Up to now the interaction between the two enzymatic activities remained elusive, mainly because of missing structural information. Here we present the crystal structure of human PAPSS1 at 1.8 angstroms resolution. The structure reveals a homodimeric, asymmetric complex with the shape of a chair. The two kinase domains adopt different conformational states, with only one being able to bind its two substrates. The asymmetric binding of ADP to the APS kinase is not only observed in the crystal structure, but can also be detected in solution, using an enzymatic assay. These observations strongly indicate structural changes during the reaction cycle. Furthermore crystals soaked with ADP and APS could be prepared and the corresponding structures could be solved.

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Year:  2005        PMID: 15755455     DOI: 10.1016/j.jmb.2005.01.005

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  22 in total

1.  Recapitulating the Structural Evolution of Redox Regulation in Adenosine 5'-Phosphosulfate Kinase from Cyanobacteria to Plants.

Authors:  Jonathan Herrmann; David Nathin; Soon Goo Lee; Tony Sun; Joseph M Jez
Journal:  J Biol Chem       Date:  2015-08-20       Impact factor: 5.157

2.  Purification, crystallization and preliminary X-ray diffraction analysis of adenosine triphosphate sulfurylase (ATPS) from the sulfate-reducing bacterium Desulfovibrio desulfuricans ATCC 27774.

Authors:  Olga Yu Gavel; Anna V Kladova; Sergey A Bursakov; João M Dias; Susana Texeira; Valery L Shnyrov; José J G Moura; Isabel Moura; Maria J Romão; José Trincão
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2008-06-07

3.  Elucidation of the active conformation of the APS-kinase domain of human PAPS synthetase 1.

Authors:  Nikolina Sekulic; Kristen Dietrich; Ingo Paarmann; Stephan Ort; Manfred Konrad; Arnon Lavie
Journal:  J Mol Biol       Date:  2007-01-12       Impact factor: 5.469

4.  Nucleotide binding site communication in Arabidopsis thaliana adenosine 5'-phosphosulfate kinase.

Authors:  Geoffrey E Ravilious; Joseph M Jez
Journal:  J Biol Chem       Date:  2012-07-18       Impact factor: 5.157

5.  Substrate recognition, protein dynamics, and iron-sulfur cluster in Pseudomonas aeruginosa adenosine 5'-phosphosulfate reductase.

Authors:  Justin Chartron; Kate S Carroll; Carrie Shiau; Hong Gao; Julie A Leary; Carolyn R Bertozzi; C David Stout
Journal:  J Mol Biol       Date:  2006-09-01       Impact factor: 5.469

Review 6.  Sulfation pathways from red to green.

Authors:  Süleyman Günal; Rebecca Hardman; Stanislav Kopriva; Jonathan Wolf Mueller
Journal:  J Biol Chem       Date:  2019-07-02       Impact factor: 5.157

7.  Structure and mechanism of soybean ATP sulfurylase and the committed step in plant sulfur assimilation.

Authors:  Jonathan Herrmann; Geoffrey E Ravilious; Samuel E McKinney; Corey S Westfall; Soon Goo Lee; Patrycja Baraniecka; Marco Giovannetti; Stanislav Kopriva; Hari B Krishnan; Joseph M Jez
Journal:  J Biol Chem       Date:  2014-02-28       Impact factor: 5.157

8.  Structure of the two-domain hexameric APS kinase from Thiobacillus denitrificans: structural basis for the absence of ATP sulfurylase activity.

Authors:  Sean C Gay; Irwin H Segel; Andrew J Fisher
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-09-16

9.  Sulfate activation enzymes: phylogeny and association with pyrophosphatase.

Authors:  Michael E Bradley; Joshua S Rest; Wen-Hsiung Li; Nancy B Schwartz
Journal:  J Mol Evol       Date:  2008-12-06       Impact factor: 2.395

10.  Human PAPS synthase isoforms are dynamically regulated enzymes with access to nucleus and cytoplasm.

Authors:  Elisabeth Schröder; Lena Gebel; Andrey A Eremeev; Jessica Morgner; Daniel Grum; Shirley K Knauer; Peter Bayer; Jonathan W Mueller
Journal:  PLoS One       Date:  2012-01-05       Impact factor: 3.240

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