Literature DB >> 15752699

The first archaeal agmatinase from anaerobic hyperthermophilic archaeon Pyrococcus horikoshii: cloning, expression, and characterization.

Shuichiro Goda1, Haruhiko Sakuraba, Yutaka Kawarabayasi, Toshihisa Ohshima.   

Abstract

Agmatinase is one of the key enzymes in the biosynthesis of polyamines such as putrescine and sperimidine from arginine in microorganisms. The gene (PH0083) encoding the putative agmatinase of hyperthermophilic archaeon Pyrococcus horikoshii was identified based on the genome database. The gene was cloned and expressed, and the product was mainly obtained as inactive inclusion body in Escherichia coli. The inclusion body was dissolved in 6 M guanidine-HCl and successively refolded to active enzyme by the dilution of the denaturant. The enzyme exclusively catalyzed the hydrolysis of agmatine, but not arginine. This indicates that PH0083 codes agmatinase. The enzyme required divalent cations such as Co(2+), Ca(2+) and Mn(2+) for the activity. The highest activity was observed under fairly alkaline conditions, like pH 11. The purified recombinant enzyme consisted of four identical subunits with a molecular mass of 110-145 kDa. The enzyme was extremely thermostable: the full activity was retained on heating at 80 degrees C for 10 min, and a half of the activity was retained by incubation at 90 degrees C for 10 min. From a typical Michaelis-Menten type kinetics, an apparent K(m) value for agmatine was determined to be 0.53 mM. Phylogenic analysis revealed that the agmatinase from P. horikoshii does not belong to any clusters of enzymes found in bacteria and eukarya. This is the first description of the presence of archaeal agmatinase and its characteristics.

Entities:  

Mesh:

Substances:

Year:  2005        PMID: 15752699     DOI: 10.1016/j.bbapap.2004.12.010

Source DB:  PubMed          Journal:  Biochim Biophys Acta        ISSN: 0006-3002


  9 in total

1.  Novel Route for Agmatine Catabolism in Aspergillus niger Involves 4-Guanidinobutyrase.

Authors:  Sunil Kumar; Tejaswani Saragadam; Narayan S Punekar
Journal:  Appl Environ Microbiol       Date:  2015-06-05       Impact factor: 4.792

2.  Dual biosynthesis pathway for longer-chain polyamines in the hyperthermophilic archaeon Thermococcus kodakarensis.

Authors:  Nanako Morimoto; Wakao Fukuda; Nanami Nakajima; Takeaki Masuda; Yusuke Terui; Tamotsu Kanai; Tairo Oshima; Tadayuki Imanaka; Shinsuke Fujiwara
Journal:  J Bacteriol       Date:  2010-07-30       Impact factor: 3.490

3.  Functional Insights Into Protein Acetylation in the Hyperthermophilic Archaeon Sulfolobus islandicus.

Authors:  Jingjing Cao; Tongkun Wang; Qian Wang; Xiaowei Zheng; Li Huang
Journal:  Mol Cell Proteomics       Date:  2019-06-09       Impact factor: 5.911

Review 4.  Polyamines in Eukaryotes, Bacteria, and Archaea.

Authors:  Anthony J Michael
Journal:  J Biol Chem       Date:  2016-06-07       Impact factor: 5.157

5.  Crenarchaeal arginine decarboxylase evolved from an S-adenosylmethionine decarboxylase enzyme.

Authors:  Teresa N Giles; David E Graham
Journal:  J Biol Chem       Date:  2008-07-23       Impact factor: 5.157

6.  Vaginal biogenic amines: biomarkers of bacterial vaginosis or precursors to vaginal dysbiosis?

Authors:  Tiffanie M Nelson; Joanna-Lynn C Borgogna; Rebecca M Brotman; Jacques Ravel; Seth T Walk; Carl J Yeoman
Journal:  Front Physiol       Date:  2015-09-29       Impact factor: 4.566

7.  Deciphering the Translation Initiation Factor 5A Modification Pathway in Halophilic Archaea.

Authors:  Laurence Prunetti; Michael Graf; Ian K Blaby; Lauri Peil; Andrea M Makkay; Agata L Starosta; R Thane Papke; Tairo Oshima; Daniel N Wilson; Valérie de Crécy-Lagard
Journal:  Archaea       Date:  2016-12-08       Impact factor: 3.273

8.  The first description of complete invertebrate arginine metabolism pathways implies dose-dependent pathogen regulation in Apostichopus japonicus.

Authors:  Shao Yina; Li Chenghua; Zhang Weiwei; Wang Zhenhui; Lv Zhimeng
Journal:  Sci Rep       Date:  2016-04-01       Impact factor: 4.379

9.  Three Related Enzymes in Candida albicans Achieve Arginine- and Agmatine-Dependent Metabolism That Is Essential for Growth and Fungal Virulence.

Authors:  Katja Schaefer; Jeanette Wagener; Ryan M Ames; Stella Christou; Donna M MacCallum; Steven Bates; Neil A R Gow
Journal:  mBio       Date:  2020-08-11       Impact factor: 7.867

  9 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.