Literature DB >> 15750848

Single particle analysis: a new approach to solving the 3D structure of myosin filaments.

Hind A Al-Khayat1, Edward P Morris, John M Squire.   

Abstract

Knowledge of the structure of muscle myosin filaments is essential for a proper understanding of sarcomere structure and how myosin heads interact with the actin filaments to produce force and movement. Two principal methods have been used to define the myosin head arrays in filaments in the relaxed state, namely modelling from low-angle X-ray diffraction data and image processing of electron micrographs of isolated filaments. Analysis of filament images by 3D helical reconstruction, which imposes total helical symmetry on the structure, is very effective in some cases, but it relies on the existence of very highly ordered preparations of straight filaments. Resolutions achieved to date are about 70 angstroms. Modelling of X-ray diffraction data recorded from whole relaxed fish or insect muscles has also been used as an independent method. Although the resolution of the diffraction data is often also about 70 angstroms, the effective resolution of the modelling is very much higher than this because additional very high resolution data (e.g. from protein crystallography) is included in the analysis. However, the X-ray diffraction method has to date provided only limited data on non-myosin thick filament proteins such as C-protein and titin and it cannot provide the polarity of the myosin head arrangement. Both the helical reconstruction and X-ray diffraction techniques have advantages and disadvantages, but their disadvantages are avoided in the new approach of single particle analysis of electron micrograph data. Even using the same micrographs as for helical reconstruction, the resolution can be extended by this method to about 50 angstroms or better. In addition, it is not necessary to assume that the myosin filaments are helical; a significant advantage in the case of vertebrate myosin filaments where there is a known crossbridge perturbation. Here we describe the principles of all these approaches, but particularly that of single particle analysis. We outline the application of single particle analysis to myosin filaments from vertebrate skeletal and insect flight (IFM) muscle myosin filaments.

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Year:  2005        PMID: 15750848     DOI: 10.1007/s10974-004-5333-5

Source DB:  PubMed          Journal:  J Muscle Res Cell Motil        ISSN: 0142-4319            Impact factor:   2.698


  43 in total

1.  EMAN: semiautomated software for high-resolution single-particle reconstructions.

Authors:  S J Ludtke; P R Baldwin; W Chiu
Journal:  J Struct Biol       Date:  1999-12-01       Impact factor: 2.867

2.  Challenges at the frontiers of structural biology.

Authors:  Helen R Saibil; Elena V Orlova
Journal:  Nat Struct Biol       Date:  2002-06

3.  Structural evidence for the interaction of C-protein (MyBP-C) with actin and sequence identification of a possible actin-binding domain.

Authors:  John M Squire; Pradeep K Luther; Carlo Knupp
Journal:  J Mol Biol       Date:  2003-08-15       Impact factor: 5.469

4.  ELECTRON MICROSCOPE STUDIES ON THE STRUCTURE OF NATURAL AND SYNTHETIC PROTEIN FILAMENTS FROM STRIATED MUSCLE.

Authors:  H E HUXLEY
Journal:  J Mol Biol       Date:  1963-09       Impact factor: 5.469

5.  Image averaging of flexible fibrous macromolecules: the clathrin triskelion has an elastic proximal segment.

Authors:  E Kocsis; B L Trus; C J Steer; M E Bisher; A C Steven
Journal:  J Struct Biol       Date:  1991-08       Impact factor: 2.867

6.  Studies on the structure of myosin.

Authors:  S LOWEY; C COHEN
Journal:  J Mol Biol       Date:  1962-04       Impact factor: 5.469

7.  PHOELIX: a package for semi-automated helical reconstruction.

Authors:  M Whittaker; B O Carragher; R A Milligan
Journal:  Ultramicroscopy       Date:  1995-06       Impact factor: 2.689

8.  Three-dimensional structure of the vertebrate muscle A-band. II. The myosin filament superlattice.

Authors:  P K Luther; J M Squire
Journal:  J Mol Biol       Date:  1980-08-25       Impact factor: 5.469

9.  Myosin head configuration in relaxed insect flight muscle: x-ray modeled resting cross-bridges in a pre-powerstroke state are poised for actin binding.

Authors:  Hind A AL-Khayat; Liam Hudson; Michael K Reedy; Thomas C Irving; John M Squire
Journal:  Biophys J       Date:  2003-08       Impact factor: 4.033

10.  Three-dimensional structure of myosin subfragment-1: a molecular motor.

Authors:  I Rayment; W R Rypniewski; K Schmidt-Bäse; R Smith; D R Tomchick; M M Benning; D A Winkelmann; G Wesenberg; H M Holden
Journal:  Science       Date:  1993-07-02       Impact factor: 47.728

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  12 in total

Review 1.  Invertebrate muscles: thin and thick filament structure; molecular basis of contraction and its regulation, catch and asynchronous muscle.

Authors:  Scott L Hooper; Kevin H Hobbs; Jeffrey B Thuma
Journal:  Prog Neurobiol       Date:  2008-06-20       Impact factor: 11.685

Review 2.  Muscle myosin filaments: cores, crowns and couplings.

Authors:  John M Squire
Journal:  Biophys Rev       Date:  2009-09-11

3.  Random myosin loss along thick-filaments increases myosin attachment time and the proportion of bound myosin heads to mitigate force decline in skeletal muscle.

Authors:  Bertrand C W Tanner; Mark McNabb; Bradley M Palmer; Michael J Toth; Mark S Miller
Journal:  Arch Biochem Biophys       Date:  2014-01-31       Impact factor: 4.013

4.  Zebrafish cardiac muscle thick filaments: isolation technique and three-dimensional structure.

Authors:  Maryví González-Solá; Hind A Al-Khayat; Martine Behra; Robert W Kensler
Journal:  Biophys J       Date:  2014-04-15       Impact factor: 4.033

5.  Atomic model of the human cardiac muscle myosin filament.

Authors:  Hind A Al-Khayat; Robert W Kensler; John M Squire; Steven B Marston; Edward P Morris
Journal:  Proc Natl Acad Sci U S A       Date:  2012-12-18       Impact factor: 11.205

6.  Geometrical conditions indispensable for muscle contraction.

Authors:  Ludmila Skubiszak
Journal:  Int J Mol Sci       Date:  2011-03-29       Impact factor: 5.923

Review 7.  Three-dimensional structure of the human myosin thick filament: clinical implications.

Authors:  Hind A Al-Khayat
Journal:  Glob Cardiol Sci Pract       Date:  2013-11-01

8.  Head-head interactions of resting myosin crossbridges in intact frog skeletal muscles, revealed by synchrotron x-ray fiber diffraction.

Authors:  Kanji Oshima; Yasunobu Sugimoto; Thomas C Irving; Katsuzo Wakabayashi
Journal:  PLoS One       Date:  2012-12-20       Impact factor: 3.240

9.  Sarcomere lattice geometry influences cooperative myosin binding in muscle.

Authors:  Bertrand C W Tanner; Thomas L Daniel; Michael Regnier
Journal:  PLoS Comput Biol       Date:  2007-07       Impact factor: 4.475

10.  Myosin filament 3D structure in mammalian cardiac muscle.

Authors:  Hind A Al-Khayat; Edward P Morris; Robert W Kensler; John M Squire
Journal:  J Struct Biol       Date:  2008-04-04       Impact factor: 2.867

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