Literature DB >> 15746425

Life at depth: Photobacterium profundum genome sequence and expression analysis.

A Vezzi1, S Campanaro, M D'Angelo, F Simonato, N Vitulo, F M Lauro, A Cestaro, G Malacrida, B Simionati, N Cannata, C Romualdi, D H Bartlett, G Valle.   

Abstract

Deep-sea life requires adaptation to high pressure, an extreme yet common condition given that oceans cover 70% of Earth's surface and have an average depth of 3800 meters. Survival at such depths requires specific adaptation but, compared with other extreme conditions, high pressure has received little attention. Recently, Photobacterium profundum strain SS9 has been adopted as a model for piezophily. Here we report its genome sequence (6.4 megabase pairs) and transcriptome analysis. The results provide a first glimpse into the molecular basis for life in the largest portion of the biosphere, revealing high metabolic versatility.

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Year:  2005        PMID: 15746425     DOI: 10.1126/science.1103341

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  88 in total

1.  Isolation and characterization of a psychropiezophilic alphaproteobacterium.

Authors:  Emiley A Eloe; Francesca Malfatti; Jennifer Gutierrez; Kevin Hardy; Wilford E Schmidt; Kit Pogliano; Joe Pogliano; Farooq Azam; Douglas H Bartlett
Journal:  Appl Environ Microbiol       Date:  2011-09-23       Impact factor: 4.792

Review 2.  Diversity in transcripts and translational pattern of stress proteins in marine extremophiles.

Authors:  I V Ambily Nath; P A Loka Bharathi
Journal:  Extremophiles       Date:  2011-01-06       Impact factor: 2.395

3.  Single cells within the Puerto Rico trench suggest hadal adaptation of microbial lineages.

Authors:  Rosa León-Zayas; Mark Novotny; Sheila Podell; Charles M Shepard; Eric Berkenpas; Sergey Nikolenko; Pavel Pevzner; Roger S Lasken; Douglas H Bartlett
Journal:  Appl Environ Microbiol       Date:  2015-09-18       Impact factor: 4.792

4.  Characterization of Vibrio cholerae RyhB: the RyhB regulon and role of ryhB in biofilm formation.

Authors:  Alexandra R Mey; Stephanie A Craig; Shelley M Payne
Journal:  Infect Immun       Date:  2005-09       Impact factor: 3.441

Review 5.  Ten years of bacterial genome sequencing: comparative-genomics-based discoveries.

Authors:  Tim T Binnewies; Yair Motro; Peter F Hallin; Ole Lund; David Dunn; Tom La; David J Hampson; Matthew Bellgard; Trudy M Wassenaar; David W Ussery
Journal:  Funct Integr Genomics       Date:  2006-05-12       Impact factor: 3.410

Review 6.  Bacterial genes responsible for the biosynthesis of eicosapentaenoic and docosahexaenoic acids and their heterologous expression.

Authors:  Hidetoshi Okuyama; Yoshitake Orikasa; Takanori Nishida; Kazuo Watanabe; Naoki Morita
Journal:  Appl Environ Microbiol       Date:  2006-11-22       Impact factor: 4.792

7.  The unique 16S rRNA genes of piezophiles reflect both phylogeny and adaptation.

Authors:  Federico M Lauro; Roger A Chastain; Lesley E Blankenship; A Aristides Yayanos; Douglas H Bartlett
Journal:  Appl Environ Microbiol       Date:  2006-12-08       Impact factor: 4.792

8.  Gambling in the deep sea.

Authors:  Laura Ruth
Journal:  EMBO Rep       Date:  2006-01       Impact factor: 8.807

9.  Mutations in ampG and lytic transglycosylase genes affect the net release of peptidoglycan monomers from Vibrio fischeri.

Authors:  Dawn M Adin; Jacquelyn T Engle; William E Goldman; Margaret J McFall-Ngai; Eric V Stabb
Journal:  J Bacteriol       Date:  2008-12-12       Impact factor: 3.490

10.  Two distinct Photobacterium populations thrive in ancient Mediterranean sapropels.

Authors:  Jacqueline Süss; Kerstin Herrmann; Michael Seidel; Heribert Cypionka; Bert Engelen; Henrik Sass
Journal:  Microb Ecol       Date:  2007-09-16       Impact factor: 4.552

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