Literature DB >> 15746289

WebAllergen: a web server for predicting allergenic proteins.

Tariq Riaz1, Hen Ley Hor, Arun Krishnan, Francis Tang, Kuo-Bin Li.   

Abstract

UNLABELLED: WebAllergen is a web server that predicts the potential allergenicity of proteins. The query protein will be compared against a set of prebuilt allergenic motifs that have been obtained from 664 known allergen proteins. The query will also be compared with known allergens that do not have detectable allergenic motifs. Moreover, users are allowed to upload their own allergens as alternative training sequences on which a new set of allergenic motifs will be built. The query sequences can also be compared with these motifs. AVAILABILITY: http://weballergen.bii.a-star.edu.sg/

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Year:  2005        PMID： 15746289     DOI： 10.1093/bioinformatics/bti356

Source DB:  PubMed          Journal:  Bioinformatics        ISSN： 1367-4803            Impact factor:   6.937


  9 in total

1.  Distinguishing allergens from non-allergenic homologues using Physical-Chemical Property (PCP) motifs.

Authors:  Wenzhe Lu; Surendra S Negi; Catherine H Schein; Soheila J Maleki; Barry K Hurlburt; Werner Braun
Journal:  Mol Immunol       Date:  2018-04-06       Impact factor: 4.407

Review 2.  Bioinformatics approaches to classifying allergens and predicting cross-reactivity.

Authors:  Catherine H Schein; Ovidiu Ivanciuc; Werner Braun
Journal:  Immunol Allergy Clin North Am       Date:  2007-02       Impact factor: 3.479

3.  Allerdictor: fast allergen prediction using text classification techniques.

Authors:  Ha X Dang; Christopher B Lawrence
Journal:  Bioinformatics       Date:  2014-01-07       Impact factor: 6.937

4.  Characteristic motifs for families of allergenic proteins.

Authors:  Ovidiu Ivanciuc; Tzintzuni Garcia; Miguel Torres; Catherine H Schein; Werner Braun
Journal:  Mol Immunol       Date:  2008-10-31       Impact factor: 4.407

5.  AlgPred: prediction of allergenic proteins and mapping of IgE epitopes.

Authors:  Sudipto Saha; G P S Raghava
Journal:  Nucleic Acids Res       Date:  2006-07-01       Impact factor: 16.971

6.  An SVM method using evolutionary information for the identification of allergenic proteins.

Authors:  Kandaswamy Krishna Kumar; Prakash Shrikrishna Shelokar
Journal:  Bioinformation       Date:  2008-01-27

7.  EVALLER: a web server for in silico assessment of potential protein allergenicity.

Authors:  Alvaro Martinez Barrio; Daniel Soeria-Atmadja; Anders Nistér; Mats G Gustafsson; Ulf Hammerling; Erik Bongcam-Rudloff
Journal:  Nucleic Acids Res       Date:  2007-05-30       Impact factor: 16.971

8.  MalVac: database of malarial vaccine candidates.

Authors:  Rupanjali Chaudhuri; Shakil Ahmed; Faraz Alam Ansari; Harinder Vir Singh; Srinivasan Ramachandran
Journal:  Malar J       Date:  2008-09-23       Impact factor: 2.979

9.  AllergenPro: an integrated database for allergenicity analysis and prediction.

Authors:  Chang-Kug Kim; Young-Joo Seol; Dong-Jun Lee; In-Seon Jeong; Ung-Han Yoon; Jong-Yeol Lee; Gang-Seob Lee; Dong-Suk Park
Journal:  Bioinformation       Date:  2014-06-30
  9 in total

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