Literature DB >> 15729399

Genome relationships in polyploid Poa pratensis and other Poa species inferred from phylogenetic analysis of nuclear and chloroplast DNA sequences.

Jason T Patterson1, Steven R Larson, Paul G Johnson.   

Abstract

The genus Poa comprises approximately 500 species that occur throughout the world, including the widely grown Kentucky bluegrass (P. pratensis L.). Hybridization and polyploidization have played a prominent role in the evolution of this complex genus, but limited information is available regarding genome relationships in Poa. Thus, we amplified, cloned, and compared the DNA sequences of 2 nuclear genes (CDO504 and thioredoxin-like protein) and 2 chloroplast genome loci (ndhF and trnT-trnF) from 22 Poa species. Four distinct classes of sequences corresponding to 4 putative homoeologous loci from each nuclear gene were found within polyploid P. pratensis. Nuclear sequences from 15 other Poa species were found to group with at least 1 P. pratensis homoeolog, whereas 6 species displayed sequences not present in P. pratensis. The nuclear genome phylogenies presented here show the first evidence of diverse and related genomes in the genus Poa.

Entities:  

Mesh:

Substances:

Year:  2005        PMID: 15729399     DOI: 10.1139/g04-102

Source DB:  PubMed          Journal:  Genome        ISSN: 0831-2796            Impact factor:   2.166


  12 in total

1.  Leymus EST linkage maps identify 4NsL-5NsL reciprocal translocation, wheat-Leymus chromosome introgressions, and functionally important gene loci.

Authors:  Steven R Larson; Masahiro Kishii; Hisashi Tsujimoto; Lili Qi; Peidu Chen; Gerard R Lazo; Kevin B Jensen; Richard R-C Wang
Journal:  Theor Appl Genet       Date:  2011-09-14       Impact factor: 5.699

2.  Limited genetic divergence among Australian alpine Poa tussock grasses coupled with regional structuring points to ongoing gene flow and taxonomic challenges.

Authors:  Philippa C Griffin; Ary A Hoffmann
Journal:  Ann Bot       Date:  2014-03-07       Impact factor: 4.357

3.  The introgression of a functional nuclear gene from Poa to Festuca ovina.

Authors:  Lena Ghatnekar; Maarit Jaarola; Bengt O Bengtsson
Journal:  Proc Biol Sci       Date:  2006-02-22       Impact factor: 5.349

4.  A next-generation sequencing method for overcoming the multiple gene copy problem in polyploid phylogenetics, applied to Poa grasses.

Authors:  Philippa C Griffin; Charles Robin; Ary A Hoffmann
Journal:  BMC Biol       Date:  2011-03-23       Impact factor: 7.431

5.  Understanding Genetic Diversity and Population Structure of a Poa pratensis Worldwide Collection through Morphological, Nuclear and Chloroplast Diversity Analysis.

Authors:  Lorenzo Raggi; Elena Bitocchi; Luigi Russi; Gianpiero Marconi; Timothy F Sharbel; Fabio Veronesi; Emidio Albertini
Journal:  PLoS One       Date:  2015-04-20       Impact factor: 3.240

6.  Genetic diversity of Poa pratensis L. depending on geographical origin and compared with genetic markers.

Authors:  Magdalena Szenejko; Przemysław Śmietana; Edyta Stępień
Journal:  PeerJ       Date:  2016-09-27       Impact factor: 2.984

7.  Poa secunda local collections and commercial releases: A genotypic evaluation.

Authors:  Alanna N Shaw; Daniel L Mummey
Journal:  PLoS One       Date:  2017-04-03       Impact factor: 3.240

8.  Isolation and characterization of chromosomal markers in Poa pratensis.

Authors:  Yanyan Zhao; Feng Yu; Ruijuan Liu; Quanwen Dou
Journal:  Mol Cytogenet       Date:  2017-03-09       Impact factor: 2.009

9.  Poasecunda J. Presl (Poaceae): a modern summary of infraspecific taxonomy, chromosome numbers, related species and infrageneric placement based on DNA.

Authors:  Robert John Soreng; Lynn J Gillespie
Journal:  PhytoKeys       Date:  2018-11-05       Impact factor: 1.635

10.  Comparative genomics of ParaHox clusters of teleost fishes: gene cluster breakup and the retention of gene sets following whole genome duplications.

Authors:  Nicol Siegel; Simone Hoegg; Walter Salzburger; Ingo Braasch; Axel Meyer
Journal:  BMC Genomics       Date:  2007-09-06       Impact factor: 3.969

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.