Literature DB >> 15726141

Probing the nature of the Co(III) ion in cobalamins: a comparison of the reaction of aquacobalamin (vitamin B12a) and aqua-10-chlorocobalamin with some anionic and N-donor ligands.

Leanne Knapton1, Helder M Marques.   

Abstract

To probe the cis effect of the corrin macrocycle in vitamin B12 derivatives, equilibrium constants for the substitution of coordinated H2O in aquacobalamin (vitamin B12a, H2OCbl+) and in aqua-10-chlorocobalamin, H2O-10-ClCbl+, (in which Cl has replaced the C10 H) by an exogenous ligand, L (L = an anion, NO2-, SCN-, N3-, OCN-, S2O3(2-), NCSe- or a neutral N-donor, CH3NH2, pyridine, imidazole) have been determined. The cis influence reported in the electronic spectra of the cobalamins is observed in the spectra of L-10-ClCbls as well. Anionic ligands bind more strongly to H2O-10-ClCbl+ than to H2OCbl+ with log K values between 0.10 and 0.63 (average 0.26) larger; the converse is true for the neutral N-donor ligands, where log K is between 0.17 and 0.3 (average 0.25) smaller. Semi-empirical molecular orbital (SEMO) calculations using the ZINDO/1 model on the hydroxo complexes show that charge density is delocalised from the axial donor atom to the metal and Cl. This explains why coordinated OH- is a poorer base in HO-10-ClCbl than in HOCbl and the pK(a) of H2O-10-ClCbl+ is lower than that of H2OCbl+. It further explains why, because of the ability of the metal in concert with the C10 Cl to accept charge density from the ligand, an anionic ligand will bind more strongly to Co(III) in H2O-10-ClCbl+ than in H2OCbl+. The kinetics of the replacement of coordinated H2O by two probe ligand, pyridine and azide, were determined. The rate constants for substitution of H2O in H2O-10-ClCbl+ by pyridine show saturation, whilst those for substitution by N3- do not; this is inconsistent with a purely dissociative mechanism and the reactions proceed through an interchange mechanism. The values of the activation parameters are more positive for the reaction between these ligands and H2OCbl+, than for their reaction with H2O-10-ClCbl+. This is interpreted to mean that the transition state in the reaction of H2O-10-ClCbl+ occurs earlier along the reaction coordinate. In the temperature range studied, H2O-10-ClCbl+ reacts more slowly with py and N3- than does H2OCbl+. SEMO calculations indicate that as the Co-O bond to the departing H(2)O molecule is stretched, the charge density on Co in H2OCbl+ is always lower than on Co in H2O-10-ClCbl+. This suggests that the former is a better electrophile towards the incoming ligand, and offers an explanation for the kinetics observations.

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Year:  2005        PMID: 15726141     DOI: 10.1039/b416083e

Source DB:  PubMed          Journal:  Dalton Trans        ISSN: 1477-9226            Impact factor:   4.390


  9 in total

1.  Catalytic effect of riboflavin on electron transfer from NADH to aquacobalamin.

Authors:  Ilia A Dereven'kov; Luciana Hannibal; Sergei V Makarov; Pavel A Molodtsov
Journal:  J Biol Inorg Chem       Date:  2019-11-26       Impact factor: 3.358

2.  Mechanistic Studies on the Reaction of Nitrocobalamin with Glutathione: Kinetic evidence for formation of an aquacobalamin intermediate.

Authors:  David T Walker; Rohan S Dassanayake; Kamille A Garcia; Riya Mukherjee; Nicola E Brasch
Journal:  Eur J Inorg Chem       Date:  2013-06-01       Impact factor: 2.524

3.  X-ray structural characterization of imidazolylcobalamin and histidinylcobalamin: cobalamin models for aquacobalamin bound to the B12 transporter protein transcobalamin.

Authors:  Luciana Hannibal; Scott D Bunge; Rudi van Eldik; Donald W Jacobsen; Christoph Kratky; Karl Gruber; Nicola E Brasch
Journal:  Inorg Chem       Date:  2007-04-04       Impact factor: 5.165

4.  Mechanism of cyanocobalamin chlorination by hypochlorous acid.

Authors:  Ilia A Dereven'kov; Vladimir S Osokin; Luciana Hannibal; Sergei V Makarov; Ilya A Khodov; Oskar I Koifman
Journal:  J Biol Inorg Chem       Date:  2021-04-29       Impact factor: 3.358

5.  A simple, convenient method to synthesize cobalamins: synthesis of homocysteinylcobalamin, N-acetylcysteinylcobalamin, 2-N-acetylamino-2-carbomethoxyethanethiolatocobalamin, sulfitocobalamin and nitrocobalamin.

Authors:  Edward Suarez-Moreira; Luciana Hannibal; Clyde A Smith; Roberto A Chavez; Donald W Jacobsen; Nicola E Brasch
Journal:  Dalton Trans       Date:  2006-09-21       Impact factor: 4.390

6.  Characterization of the complex between native and reduced bovine serum albumin with aquacobalamin and evidence of dual tetrapyrrole binding.

Authors:  Ilia A Dereven'kov; Luciana Hannibal; Sergei V Makarov; Anna S Makarova; Pavel A Molodtsov; Oskar I Koifman
Journal:  J Biol Inorg Chem       Date:  2018-05-02       Impact factor: 3.358

7.  Mechanistic studies on the reaction between R2N-NONOates and aquacobalamin: evidence for direct transfer of a nitroxyl group from R2N-NONOates to cobalt(III) centers.

Authors:  Hanaa A Hassanin; Luciana Hannibal; Donald W Jacobsen; Mohamed F El-Shahat; Mohamed S A Hamza; Nicola E Brasch
Journal:  Angew Chem Int Ed Engl       Date:  2009       Impact factor: 15.336

8.  Accurate assessment and identification of naturally occurring cellular cobalamins.

Authors:  Luciana Hannibal; Armend Axhemi; Alla V Glushchenko; Edward S Moreira; Nicola E Brasch; Donald W Jacobsen
Journal:  Clin Chem Lab Med       Date:  2008       Impact factor: 3.694

9.  High resolution crystal structure of the methylcobalamin analogues ethylcobalamin and butylcobalamin by X-ray synchrotron diffraction.

Authors:  Luciana Hannibal; Clyde A Smith; Jessica A Smith; Armend Axhemi; Abby Miller; Sihe Wang; Nicola E Brasch; Donald W Jacobsen
Journal:  Inorg Chem       Date:  2009-07-20       Impact factor: 5.165

  9 in total

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