Literature DB >> 15722436

EPR studies of chlorocatechol 1,2-dioxygenase: evidences of iron reduction during catalysis and of the binding of amphipatic molecules.

Ana P S Citadini1, Andressa P A Pinto, Ana P U Araújo, Otaciro R Nascimento, Antonio J Costa-Filho.   

Abstract

Chlorocatechol 1,2-dioxygenase from Pseudomonas putida (Pp 1,2-CCD) is a dioxygenase responsible for ring cleavage during the degradation of recalcitrant aromatic compounds. We determined the zero-field splitting of the Fe(III) cofactor (|D| = 1.3 +/- 0.2 cm(-1)) by electron paramagnetic resonance (EPR) experiments that along with other structural data allowed us to infer the Fe(III) coordination environment. The EPR spectrum of the ion shows a significantly decrease of the g = 4.3 resonance upon substrate binding. This result is rationalized in terms of a mechanism previously proposed, where catechol substrate is activated by Fe(III), yielding an exchange-coupled Fe(II)-semiquinone (pair). The Pp 1,2-CCD capacity of binding amphipatic molecules and the effects of such binding on protein activity are also investigated. EPR spectra of spin labels show a protein-bound component, which was characterized by means of spectral simulations. Our results indicate that Pp 1,2-CCD is able to bind amphipatic molecules in a channel with the headgroup pointing outwards into the solvent, whereas the carbon chain is held inside the tunnel. Protein assays show that the enzyme activity is significantly lowered in the presence of stearic-acid molecules. The role of the binding of those molecules as an enzyme activity modulator is discussed.

Entities:  

Mesh:

Substances:

Year:  2005        PMID: 15722436      PMCID: PMC1305496          DOI: 10.1529/biophysj.104.055251

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  28 in total

Review 1.  Oxygenases: mechanisms and structural motifs for O(2) activation.

Authors:  T D Bugg
Journal:  Curr Opin Chem Biol       Date:  2001-10       Impact factor: 8.822

2.  Influence of the histidine tail on the structure and activity of recombinant chlorocatechol 1,2-dioxygenase.

Authors:  A P Araújo; G Oliva; F Henrique-Silva; R C Garratt; O Cáceres; L M Beltramini
Journal:  Biochem Biophys Res Commun       Date:  2000-06-07       Impact factor: 3.575

3.  Overproduction, purification, and characterization of chlorocatechol dioxygenase, a non-heme iron dioxygenase with broad substrate tolerance.

Authors:  J B Broderick; T V O'Halloran
Journal:  Biochemistry       Date:  1991-07-23       Impact factor: 3.162

4.  An analysis of the electron paramagnetic resonance spectrum of pseudomonas oleovorans rubredoxin. A method for determination of the liganids of ferric iron in completely rhombic sites.

Authors:  J Peisach; W E Blumberg; E T Lode; M J Coon
Journal:  J Biol Chem       Date:  1971-10-10       Impact factor: 5.157

5.  Metapyrocatechase. 3. Substrate specificity and mode of ring fission.

Authors:  M Nozaki; S Kotani; K Ono; S Seno
Journal:  Biochim Biophys Acta       Date:  1970-11-11

6.  A new non-heme iron environment in Paracoccus denitrificans adenylate kinase studied by electron paramagnetic resonance and electron spin echo envelope modulation spectroscopy.

Authors:  Y Deligiannakis; A Boussac; H Bottin; V Perrier; O Bârzu; A M Gilles
Journal:  Biochemistry       Date:  1997-08-05       Impact factor: 3.162

7.  Structure of Acinetobacter strain ADP1 protocatechuate 3, 4-dioxygenase at 2.2 A resolution: implications for the mechanism of an intradiol dioxygenase.

Authors:  M W Vetting; D A D'Argenio; L N Ornston; D H Ohlendorf
Journal:  Biochemistry       Date:  2000-07-11       Impact factor: 3.162

8.  Brevibacterium fuscum protocatechuate 3,4-dioxygenase. Purification, crystallization, and characterization.

Authors:  J W Whittaker; J D Lipscomb; T A Kent; E Münck
Journal:  J Biol Chem       Date:  1984-04-10       Impact factor: 5.157

9.  Purification and properties of catechol 1,2-dioxygenase (pyrocatechase) from Pseudomonas putida mt-2 in comparison with that from Pseudomonas arvilla C-1.

Authors:  C Nakai; T Nakazawa; M Nozaki
Journal:  Arch Biochem Biophys       Date:  1988-12       Impact factor: 4.013

10.  Electron spin resonance and electron-spin-echo study of oriented multilayers of L alpha-dipalmitoylphosphatidylcholine water systems.

Authors:  L Kar; E Ney-Igner; J H Freed
Journal:  Biophys J       Date:  1985-10       Impact factor: 4.033

View more
  5 in total

1.  Amphipatic molecules affect the kinetic profile of Pseudomonas putida chlorocatechol 1,2-dioxygenase.

Authors:  Nathalya C M R Mesquita; Fábio H Dyszy; Patricia S Kumagai; Ana P U Araújo; Antonio J Costa-Filho
Journal:  Eur Biophys J       Date:  2013-06-11       Impact factor: 1.733

2.  Crystallization and preliminary X-ray diffraction analysis of recombinant chlorocatechol 1,2-dioxygenase from Pseudomonas putida.

Authors:  Joane Kathelen Rustiguel; Matheus Pinto Pinheiro; Ana Paula Ulian Araújo; Maria Cristina Nonato
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2011-03-30

Review 3.  The two sides of a lipid-protein story.

Authors:  Luis G Mansor Basso; Luis F Santos Mendes; Antonio J Costa-Filho
Journal:  Biophys Rev       Date:  2016-04-30

4.  Defects in vesicle core induced by escherichia coli dihydroorotate dehydrogenase.

Authors:  Sheila G Couto; M Cristina Nonato; Antonio J Costa-Filho
Journal:  Biophys J       Date:  2007-11-09       Impact factor: 4.033

5.  Spin concentration measurements of high-spin (g' = 4.3) rhombic iron(III) ions in biological samples: theory and application.

Authors:  Fadi Bou-Abdallah; N Dennis Chasteen
Journal:  J Biol Inorg Chem       Date:  2007-10-12       Impact factor: 3.358

  5 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.