Literature DB >> 15722423

Identification of plasma membrane macro- and microdomains from wavelet analysis of FRET microscopy.

Evgeny Kobrinsky1, Donald E Mager, Sarah A Bentil, Shin-Ichi Murata, Darrell R Abernethy, Nikolai M Soldatov.   

Abstract

In this study, we sought to characterize functional signaling domains by applying the multiresolution properties of the continuous wavelet transform to fluorescence resonance energy transfer (FRET) microscopic images of plasma membranes. A genetically encoded FRET reporter of protein kinase C (PKC)-dependent phosphorylation was expressed in COS1 cells. Differences between wavelet coefficient matrices revealed several heterogeneous domains (typically ranging from 1 to 5 microm), reflecting the dynamic balance between PKC and phosphatase activity during stimulation with phorbol-12,13-dibutyrate or acetylcholine. The balance in these domains was not necessarily reflected in the overall plasma membrane changes, and observed heterogeneity was absent when cells were exposed to a phosphatase or PKC inhibitor. Prolonged exposure to phorbol-12,13-dibutyrate and acetylcholine yielded more homogeneous FRET distribution in plasma membranes. The proposed wavelet-based image analysis provides, for the first time, a basis and a means of detecting and quantifying dynamic changes in functional signaling domains, and may find broader application in studying fine aspects of cellular signaling by various imaging reporters.

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Year:  2005        PMID: 15722423      PMCID: PMC1305509          DOI: 10.1529/biophysj.104.054056

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  21 in total

1.  Spatial distribution analysis of AT- and GC-rich regions in nuclei using corrected fluorescence resonance energy transfer.

Authors:  Shin-Ichi Murata; Petr Herman; Kunio Mochizuki; Tadao Nakazawa; Tetsuo Kondo; Nobuki Nakamura; Joseph R Lakowicz; Ryohei Katoh
Journal:  J Histochem Cytochem       Date:  2003-07       Impact factor: 2.479

2.  Wavelet analysis of nonstationary fluctuations of Monte Carlo-simulated excitatory postsynaptic currents.

Authors:  F Aristizabal; M I Glavinovic
Journal:  Biophys J       Date:  2003-10       Impact factor: 4.033

3.  Probing plasma membrane microdomains in cowpea protoplasts using lipidated GFP-fusion proteins and multimode FRET microscopy.

Authors:  J E M Vermeer; E B Van Munster; N O Vischer; T W J Gadella
Journal:  J Microsc       Date:  2004-05       Impact factor: 1.758

4.  Spatial mapping of integrin interactions and dynamics during cell migration by image correlation microscopy.

Authors:  Paul W Wiseman; Claire M Brown; Donna J Webb; Benedict Hebert; Natalie L Johnson; Jeff A Squier; Mark H Ellisman; A F Horwitz
Journal:  J Cell Sci       Date:  2004-10-12       Impact factor: 5.285

5.  Quantitation of membrane receptor distributions by image correlation spectroscopy: concept and application.

Authors:  N O Petersen; P L Höddelius; P W Wiseman; O Seger; K E Magnusson
Journal:  Biophys J       Date:  1993-09       Impact factor: 4.033

Review 6.  Plasma membrane microdomains.

Authors:  Frederick R Maxfield
Journal:  Curr Opin Cell Biol       Date:  2002-08       Impact factor: 8.382

7.  Index for spatial heterogeneity in breast cancer.

Authors:  V Sharifi-Salamatian; B Pesquet-Popescu; J Simony-Lafontaine; J P Rigaut
Journal:  J Microsc       Date:  2004-11       Impact factor: 1.758

8.  Nanoscale organization of multiple GPI-anchored proteins in living cell membranes.

Authors:  Pranav Sharma; Rajat Varma; R C Sarasij; Karine Gousset; G Krishnamoorthy; Madan Rao; Satyajit Mayor
Journal:  Cell       Date:  2004-02-20       Impact factor: 41.582

Review 9.  Use of chimeric fluorescent proteins and fluorescence resonance energy transfer to monitor cellular responses.

Authors:  Manuela Zaccolo
Journal:  Circ Res       Date:  2004-04-16       Impact factor: 17.367

10.  A genetically encoded fluorescent reporter reveals oscillatory phosphorylation by protein kinase C.

Authors:  Jonathan D Violin; Jin Zhang; Roger Y Tsien; Alexandra C Newton
Journal:  J Cell Biol       Date:  2003-06-02       Impact factor: 10.539

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  6 in total

1.  Analysis of functional signaling domains from fluorescence imaging and the two-dimensional continuous wavelet transform.

Authors:  Donald E Mager; Evgeny Kobrinsky; Amirali Masoudieh; Anna Maltsev; Darrell R Abernethy; Nikolai M Soldatov
Journal:  Biophys J       Date:  2007-06-22       Impact factor: 4.033

Review 2.  Heterogeneity of Calcium Channel/cAMP-Dependent Transcriptional Activation.

Authors:  Evgeny Kobrinsky
Journal:  Curr Mol Pharmacol       Date:  2015       Impact factor: 3.339

3.  Microdomain organization and frequency-dependence of CREB-dependent transcriptional signaling in heart cells.

Authors:  Evgeny Kobrinsky; Son Q Duong; Anna Sheydina; Nikolai M Soldatov
Journal:  FASEB J       Date:  2011-01-19       Impact factor: 5.191

4.  Spatiotemporal analysis of endocytosis and membrane distribution of fluorescent sterols in living cells.

Authors:  Daniel Wüstner; Nils J Faergeman
Journal:  Histochem Cell Biol       Date:  2008-09-12       Impact factor: 4.304

Review 5.  Cav1.2, cell proliferation, and new target in atherosclerosis.

Authors:  Nikolai M Soldatov
Journal:  ISRN Biochem       Date:  2013-05-12

6.  Wavelet Imaging on Multiple Scales (WIMS) reveals focal adhesion distributions, dynamics and coupling between actomyosin bundle stability.

Authors:  Tim Toplak; Benoit Palmieri; Alba Juanes-García; Miguel Vicente-Manzanares; Martin Grant; Paul W Wiseman
Journal:  PLoS One       Date:  2017-10-19       Impact factor: 3.240

  6 in total

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