Literature DB >> 15709777

Alpha 1-antitrypsin polymerization: a fluorescence correlation spectroscopic study.

Pradipta Purkayastha1, Jason W Klemke, Stacey Lavender, Rolando Oyola, Barry S Cooperman, Feng Gai.   

Abstract

Alpha(1)-antitrypsin (AT) is the most abundantly circulating human proteinase inhibitor in the serpin family. The polymerization of AT, leading to alpha(1)-antitrypsin deficiency, has been studied extensively in vitro by a variety of ensemble methods. Here we report the use of fluorescence correlation spectroscopy to gain further insight into this process. Measurements of the distributions of diffusion times of polymerizing AT, carried out at 45, 50, and 55 degrees C, clearly show the existence of a kinetic lag phase, during which short oligomers are formed, prior to the formation of heterogeneous mixtures of longer polymers, and suggest that long polymers, which appear to be metastable, are produced through the condensation of shorter oligomers.

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Year:  2005        PMID: 15709777     DOI: 10.1021/bi048662e

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  13 in total

1.  Determining serpin conformational distributions with single molecule fluorescence.

Authors:  Nicole Mushero; Anne Gershenson
Journal:  Methods Enzymol       Date:  2011       Impact factor: 1.600

Review 2.  Spectroscopic studies of protein folding: linear and nonlinear methods.

Authors:  Arnaldo L Serrano; Matthias M Waegele; Feng Gai
Journal:  Protein Sci       Date:  2011-12-28       Impact factor: 6.725

3.  Defining the mechanism of polymerization in the serpinopathies.

Authors:  Ugo I Ekeowa; Joanna Freeke; Elena Miranda; Bibek Gooptu; Matthew F Bush; Juan Pérez; Jeff Teckman; Carol V Robinson; David A Lomas
Journal:  Proc Natl Acad Sci U S A       Date:  2010-09-20       Impact factor: 11.205

Review 4.  Protein misfolding and the serpinopathies.

Authors:  Didier Belorgey; Peter Hägglöf; Susanna Karlsson-Li; David A Lomas
Journal:  Prion       Date:  2007-01-06       Impact factor: 3.931

5.  The structural basis of serpin polymerization studied by hydrogen/deuterium exchange and mass spectrometry.

Authors:  Yuko Tsutsui; Barbara Kuri; Tanusree Sengupta; Patrick L Wintrode
Journal:  J Biol Chem       Date:  2008-09-15       Impact factor: 5.157

6.  Secretomic analysis identifies alpha-1 antitrypsin (A1AT) as a required protein in cancer cell migration, invasion, and pericellular fibronectin assembly for facilitating lung colonization of lung adenocarcinoma cells.

Authors:  Ying-Hua Chang; Shu-Hui Lee; I-Chuang Liao; Shin-Huei Huang; Hung-Chi Cheng; Pao-Chi Liao
Journal:  Mol Cell Proteomics       Date:  2012-08-15       Impact factor: 5.911

7.  Small molecules block the polymerization of Z alpha1-antitrypsin and increase the clearance of intracellular aggregates.

Authors:  Meera Mallya; Russell L Phillips; S Adrian Saldanha; Bibek Gooptu; Sarah C Leigh Brown; Daniel J Termine; Arash M Shirvani; Ying Wu; Richard N Sifers; Ruben Abagyan; David A Lomas
Journal:  J Med Chem       Date:  2007-10-05       Impact factor: 7.446

8.  Fluorescence correlation spectroscopic study of serpin depolymerization by computationally designed peptides.

Authors:  Pramit Chowdhury; Wei Wang; Stacey Lavender; Michelle R Bunagan; Jason W Klemke; Jia Tang; Jeffrey G Saven; Barry S Cooperman; Feng Gai
Journal:  J Mol Biol       Date:  2007-03-21       Impact factor: 5.469

9.  Denaturant-induced expansion and compaction of a multi-domain protein: IgG.

Authors:  Lin Guo; Pramit Chowdhury; Julie M Glasscock; Feng Gai
Journal:  J Mol Biol       Date:  2008-03-18       Impact factor: 5.469

Review 10.  Alpha1-antitrypsin deficiency: current perspective on research, diagnosis, and management.

Authors:  Jan Stolk; Niels Seersholm; Noor Kalsheker
Journal:  Int J Chron Obstruct Pulmon Dis       Date:  2006
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