Literature DB >> 15708002

Action of multiple base excision repair enzymes on the 2'-deoxyribonolactone.

Virginie Faure1, Murat Saparbaev, Pascal Dumy, Jean-François Constant.   

Abstract

Free radical attack on the sugar-phosphate backbone generates oxidized apurinic/apyrimidinic (AP) residues in DNA. 2'-deoxyribonolactone (dL) is a C1'-oxidized AP site damage generated by UV and gamma-irradiation, and certain anticancer drugs. If not repaired dL produces G-->A transitions in Escherichia coli. In the base excision repair (BER) pathway, AP endonucleases are the major enzymes responsible for 5'-incision of the regular AP site (dR) and dL. DNA glycosylases with associated AP lyase activity can also efficiently cleave regular AP sites. Here, we report that dL is a substrate for AP endonucleases but not for DNA glycosylases/AP lyases. The kinetic parameters of the dL-incision were similar to those of the dR. DNA glycosylases such as E. coli formamidopyrimidine-DNA glycosylase, mismatch-specific uracil-DNA glycosylase, and human alkylpurine-DNA N-glycosylase bind strongly to dL without cleaving it. We show that dL cross-links with the human proteins 8-oxoguanine-DNA (hOGG1) and thymine glycol-DNA glycosylases (hNth1), and dR cross-links with Nth and hNth1. These results suggest that dL and dR induced genotoxicity might be strengthened by BER pathway in vivo.

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Year:  2005        PMID: 15708002     DOI: 10.1016/j.bbrc.2005.01.082

Source DB:  PubMed          Journal:  Biochem Biophys Res Commun        ISSN: 0006-291X            Impact factor:   3.575


  6 in total

1.  Oxidatively Generated Guanine(C8)-Thymine(N3) Intrastrand Cross-links in Double-stranded DNA Are Repaired by Base Excision Repair Pathways.

Authors:  Ibtissam Talhaoui; Vladimir Shafirovich; Zhi Liu; Christine Saint-Pierre; Zhiger Akishev; Bakhyt T Matkarimov; Didier Gasparutto; Nicholas E Geacintov; Murat Saparbaev
Journal:  J Biol Chem       Date:  2015-04-22       Impact factor: 5.157

2.  Enzyme mechanism-based, oxidative DNA-protein cross-links formed with DNA polymerase β in vivo.

Authors:  Jason L Quiñones; Upasna Thapar; Kefei Yu; Qingming Fang; Robert William Sobol; Bruce Demple
Journal:  Proc Natl Acad Sci U S A       Date:  2015-06-29       Impact factor: 11.205

Review 3.  Formation and repair of DNA-protein crosslink damage.

Authors:  Naeh L Klages-Mundt; Lei Li
Journal:  Sci China Life Sci       Date:  2017-10-30       Impact factor: 6.038

4.  Intrinsic 5'-deoxyribose-5-phosphate lyase activity in Saccharomyces cerevisiae Trf4 protein with a possible role in base excision DNA repair.

Authors:  Lionel Gellon; Dena R Carson; Jonathan P Carson; Bruce Demple
Journal:  DNA Repair (Amst)       Date:  2007-11-05

5.  Oxidative DNA-protein crosslinks formed in mammalian cells by abasic site lyases involved in DNA repair.

Authors:  Jason L Quiñones; Upasna Thapar; Samuel H Wilson; Dale A Ramsden; Bruce Demple
Journal:  DNA Repair (Amst)       Date:  2020-01-09

6.  A kinetic platform to determine the fate of nitric oxide in Escherichia coli.

Authors:  Jonathan L Robinson; Mark P Brynildsen
Journal:  PLoS Comput Biol       Date:  2013-05-02       Impact factor: 4.475

  6 in total

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