| Literature DB >> 15706531 |
Ming Li1, Bin Ma, Derek Kisman, John Tromp.
Abstract
Extending the single optimized spaced seed of PatternHunter to multiple ones, PatternHunter II simultaneously remedies the lack of sensitivity of Blastn and the lack of speed of Smith-Waterman, for homology search. At Blastn speed, PatternHunter II approaches Smith-Waterman sensitivity, bringing homology search technology back to a full circle.Mesh:
Year: 2003 PMID: 15706531
Source DB: PubMed Journal: Genome Inform ISSN: 0919-9454