Literature DB >> 15695805

Antibody-based proteomics for human tissue profiling.

Mathias Uhlen1, Fredrik Ponten.   

Abstract

Here, we describe the use of antibody-based proteomics involving the generation of protein-specific antibodies to functionally explore the human proteome. The antibodies can be used for analysis of corresponding proteins in a wide range of assay platforms, including i) immunohistochemistry for detailed tissue profiling, ii) specific affinity reagents for various functional protein assays, and iii) capture ("pull-down") reagents for purification of specific proteins and their associated complexes for structural and biochemical analyses. In this review, the use of antibodies for such analysis will be discussed with focus on the possibility to create a descriptive and comprehensive protein atlas for tissue distribution and subcellular localization of human proteins in both normal and disease tissues.

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Year:  2005        PMID: 15695805     DOI: 10.1074/mcp.R500009-MCP200

Source DB:  PubMed          Journal:  Mol Cell Proteomics        ISSN: 1535-9476            Impact factor:   5.911


  53 in total

1.  Analysis of protein expression in cell microarrays: a tool for antibody-based proteomics.

Authors:  Ann-Catrin Andersson; Sara Strömberg; Helena Bäckvall; Caroline Kampf; Mathias Uhlen; Kenneth Wester; Fredrik Pontén
Journal:  J Histochem Cytochem       Date:  2006-09-06       Impact factor: 2.479

2.  Top-down quantitative proteomics identified phosphorylation of cardiac troponin I as a candidate biomarker for chronic heart failure.

Authors:  Jiang Zhang; Moltu J Guy; Holly S Norman; Yi-Chen Chen; Qingge Xu; Xintong Dong; Huseyin Guner; Sijian Wang; Takushi Kohmoto; Ken H Young; Richard L Moss; Ying Ge
Journal:  J Proteome Res       Date:  2011-07-28       Impact factor: 4.466

3.  The epitope space of the human proteome.

Authors:  Lisa Berglund; Jorge Andrade; Jacob Odeberg; Mathias Uhlén
Journal:  Protein Sci       Date:  2008-04       Impact factor: 6.725

4.  Parallel gene expression profiling of mantle cell lymphoma - how do we transform 'omics data into clinical practice.

Authors:  Ek Sara; Carl Ak Borrebaeck
Journal:  Curr Genomics       Date:  2007-05       Impact factor: 2.236

Review 5.  Proteomic approaches and identification of novel therapeutic targets for alcoholism.

Authors:  Giorgio Gorini; R Adron Harris; R Dayne Mayfield
Journal:  Neuropsychopharmacology       Date:  2013-07-31       Impact factor: 7.853

6.  Proteomic analysis of formalin-fixed paraffin-embedded tissue by MALDI imaging mass spectrometry.

Authors:  Rita Casadonte; Richard M Caprioli
Journal:  Nat Protoc       Date:  2011-10-13       Impact factor: 13.491

7.  The impact of tissue fixatives on morphology and antibody-based protein profiling in tissues and cells.

Authors:  Linda Paavilainen; Asa Edvinsson; Anna Asplund; Sophia Hober; Caroline Kampf; Fredrik Pontén; Kenneth Wester
Journal:  J Histochem Cytochem       Date:  2009-11-09       Impact factor: 2.479

8.  Proteome-based analysis of serologically defined tumor-associated antigens in cutaneous lymphoma.

Authors:  Michael Forgber; Sylke Gellrich; Tumenjargal Sharav; Wolfram Sterry; Peter Walden
Journal:  PLoS One       Date:  2009-12-18       Impact factor: 3.240

9.  Intact Transition Epitope Mapping (ITEM).

Authors:  Yelena Yefremova; Kwabena F M Opuni; Bright D Danquah; Hans-Juergen Thiesen; Michael O Glocker
Journal:  J Am Soc Mass Spectrom       Date:  2017-06-14       Impact factor: 3.109

10.  Proteome serological determination of tumor-associated antigens in melanoma.

Authors:  Michael Forgber; Uwe Trefzer; Wolfram Sterry; Peter Walden
Journal:  PLoS One       Date:  2009-04-17       Impact factor: 3.240

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