Literature DB >> 15695651

Evaluation of the COBAS amplicor HBV monitor assay and comparison with the ultrasensitive HBV hybrid capture 2 assay for quantification of hepatitis B virus DNA.

Eric Q Konnick1, Maria Erali, Edward R Ashwood, David R Hillyard.   

Abstract

Performance characteristics of the COBAS Amplicor HBV Monitor test (Roche Diagnostics), which measures hepatitis B virus (HBV) DNA quantitatively, were evaluated and compared with the Ultrasensitive HBV Hybrid Capture 2 (HC2; Digene Corporation) assay. Linearity and within-run precision were assessed for both methods by using eight HBV DNA-positive samples serially diluted to obtain a range of <100 to 500,000 HBV DNA copies/ml and run in triplicate. Agreement between the methods was studied with 100 clinical samples. HC2 assay performance near the limit of detection was investigated through repeat testing of 149 samples with HC2 and testing of 37 samples with HC2 results of <4,700 HBV DNA copies/ml by Amplicor assay and a qualitative PCR assay. The linearity experiment for Amplicor had regression of observed values compared to expected values (y = 1.073x - 0.247; R(2) = 0.993, n = 32; for HC2, y = 0.855x + 0.759, R(2) = 0.729, n = 18). Within-run standard deviation of log HBV DNA copies/ml ranged from 0.003 to 0.348 (Amplicor) and 0.027 to 0.253 (HC2). Agreement assessed by Deming regression was poor [Amplicor = 1.197(HC2) - 0.961; R(2) = 0.799, standard error of the estimate (SEE) = 0.710, n = 94]. Near the lower limit of detection, 32 of 149 repeat HC2 results were <4,700 HBV DNA copies/ml. Of the 37 samples with HC2 results of <4,700 HBV DNA copies/ml, HBV DNA was not detected in 15 samples, while HBV DNA was detected by at least one PCR method in 12 samples. Amplicor is linear from 200 to 200,000 HBV DNA copies/ml with undiluted samples, and this range can be expanded through dilution. Inconsistent HC2 results near the limit of detection justify use of a grey zone.

Entities:  

Mesh:

Substances:

Year:  2005        PMID: 15695651      PMCID: PMC548123          DOI: 10.1128/JCM.43.2.596-603.2005

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN: 0095-1137            Impact factor:   5.948


  56 in total

Review 1.  NAT and viral safety in blood transfusion.

Authors:  W K Roth; S Buhr; C Drosten; E Seifried
Journal:  Vox Sang       Date:  2000       Impact factor: 2.144

2.  A multicenter study evaluation of the digene hybrid capture II signal amplification technique for detection of hepatitis B virus DNA in serum samples and testing of EUROHEP standards.

Authors:  H G Niesters; M Krajden; L Cork; M de Medina; M Hill; E Fries; A D Osterhaus
Journal:  J Clin Microbiol       Date:  2000-06       Impact factor: 5.948

3.  Comparison of the nucleic acid-based crosslinking hybridization assay and the branched DNA signal amplification assay in the quantitative measurement of serum hepatitis B virus DNA.

Authors:  S J Hwang; R H Lu; M L Wood; Y J Wang; F Y Chang; S D Lee
Journal:  J Clin Lab Anal       Date:  1999       Impact factor: 2.352

4.  Identification of different states of hepatitis B virus infection with a quantitative PCR assay.

Authors:  H H Kessler; S Preininger; E Stelzl; E Daghofer; B I Santner; E Marth; H Lackner; R E Stauber
Journal:  Clin Diagn Lab Immunol       Date:  2000-03

5.  Levels of viraemia in subjects with serological markers of past or chronic hepatitis B virus infection.

Authors:  U Noborg; A Gusdal; P Horal; M Lindh
Journal:  Scand J Infect Dis       Date:  2000

6.  Development of a quantitative real-time detection assay for hepatitis B virus DNA and comparison with two commercial assays.

Authors:  S D Pas; E Fries; R A De Man; A D Osterhaus; H G Niesters
Journal:  J Clin Microbiol       Date:  2000-08       Impact factor: 5.948

7.  A randomized, placebo-controlled study to evaluate the efficacy of 12-month famciclovir treatment in patients with chronic hepatitis B e antigen-positive hepatitis B.

Authors:  R A de Man; P Marcellin; F Habal; P Desmond; T Wright; T Rose; R Jurewicz; C Young
Journal:  Hepatology       Date:  2000-08       Impact factor: 17.425

8.  Combination therapy with lamivudine and famciclovir for chronic hepatitis B-infected Chinese patients: a viral dynamics study.

Authors:  G K Lau; M Tsiang; J Hou; S Yuen; W F Carman; L Zhang; C S Gibbs; S Lam
Journal:  Hepatology       Date:  2000-08       Impact factor: 17.425

9.  Quantitative monitoring of serum hepatitis B virus DNA and blood lymphocyte subsets during combined prednisolone and interferon-alpha therapy in patients with chronic hepatitis B.

Authors:  G Z Fei; S P Sylvan; G B Yao; U B Hellström
Journal:  J Viral Hepat       Date:  1999-05       Impact factor: 3.728

10.  Hepatitis B virus persistence after recovery from acute viral hepatitis.

Authors:  T I Michalak; C Pasquinelli; S Guilhot; F V Chisari
Journal:  J Clin Invest       Date:  1994-01       Impact factor: 14.808

View more
  5 in total

1.  Evaluation of the COBAS AmpliPrep-total nucleic acid isolation-COBAS TaqMan hepatitis B virus (HBV) quantitative test and comparison to the VERSANT HBV DNA 3.0 assay.

Authors:  Christophe Ronsin; Anne Pillet; Corinne Bali; Gérard-Antoine Denoyel
Journal:  J Clin Microbiol       Date:  2006-04       Impact factor: 5.948

Review 2.  Rapid and quantitative detection of hepatitis B virus.

Authors:  Yue-Ping Liu; Chun-Yan Yao
Journal:  World J Gastroenterol       Date:  2015-11-14       Impact factor: 5.742

Review 3.  Update on hepatitis B and C virus diagnosis.

Authors:  Livia Melo Villar; Helena Medina Cruz; Jakeline Ribeiro Barbosa; Cristianne Sousa Bezerra; Moyra Machado Portilho; Letícia de Paula Scalioni
Journal:  World J Virol       Date:  2015-11-12

Review 4.  Molecular testing in the diagnosis and management of chronic hepatitis B.

Authors:  Alexandra Valsamakis
Journal:  Clin Microbiol Rev       Date:  2007-07       Impact factor: 26.132

5.  Thermostable DNA polymerase from a viral metagenome is a potent RT-PCR enzyme.

Authors:  Michael J Moser; Robert A DiFrancesco; Krishne Gowda; Audrey J Klingele; Darby R Sugar; Stacy Stocki; David A Mead; Thomas W Schoenfeld
Journal:  PLoS One       Date:  2012-06-04       Impact factor: 3.240

  5 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.