Literature DB >> 15693621

Isolation, characterization, and evolutionary divergence of mouse RNase 6: evidence for unusual evolution in rodents.

Kimberly D Dyer1, Helene F Rosenberg, Jianzhi Zhang.   

Abstract

The evolution of the ribonuclease A (RNase A) vertebrate-specific enzyme family is interesting in that specific gene lineages appear to be responding to unique selective pressures in wildly diverse manners to generate proteins that are capable of reducing the infectivity of viruses, killing systemic pathogens, and inducing the growth of blood vessels all while maintaining the signature motifs of a ribonuclease. In this paper, we present the DNA sequence and gene structure of Mus musculus RNase 6 and examine the expression pattern and enzymatic activity of the recombinant protein. M. musculus RNase 6 has a limited expression pattern compared to human RNase 6 and is an efficient ribonuclease, with a catalytic efficiency 17-fold higher than that of human protein. Evolutionary analysis reveals that RNase 6 was subject to unusual evolutionary forces (dN/dS = 1.2) in an ancestral rodent lineage before the separation of Mus and Rattus. However, more recent evolution of rodent RNase 6 has been relatively conserved, with an average dN/dS of 0.66. These data suggest that the ancestral rodent RNase 6 was subject to accelerated evolution, resulting in the conserved modern gene, which most likely plays an important role in mouse physiology.

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Year:  2004        PMID: 15693621     DOI: 10.1007/s00239-004-2657-0

Source DB:  PubMed          Journal:  J Mol Evol        ISSN: 0022-2844            Impact factor:   2.395


  40 in total

1.  Evolution of the rodent eosinophil-associated RNase gene family by rapid gene sorting and positive selection.

Authors:  J Zhang; K D Dyer; H F Rosenberg
Journal:  Proc Natl Acad Sci U S A       Date:  2000-04-25       Impact factor: 11.205

2.  Two highly homologous ribonuclease genes expressed in mouse eosinophils identify a larger subgroup of the mammalian ribonuclease superfamily.

Authors:  K A Larson; E V Olson; B J Madden; G J Gleich; N A Lee; J J Lee
Journal:  Proc Natl Acad Sci U S A       Date:  1996-10-29       Impact factor: 11.205

Review 3.  Molecular evolution of the ribonuclease superfamily.

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Journal:  Prog Biophys Mol Biol       Date:  1988       Impact factor: 3.667

4.  The neighbor-joining method: a new method for reconstructing phylogenetic trees.

Authors:  N Saitou; M Nei
Journal:  Mol Biol Evol       Date:  1987-07       Impact factor: 16.240

5.  Adaptive evolution of a duplicated pancreatic ribonuclease gene in a leaf-eating monkey.

Authors:  Jianzhi Zhang; Ya-ping Zhang; Helene F Rosenberg
Journal:  Nat Genet       Date:  2002-03-04       Impact factor: 38.330

6.  Positive Darwinian selection after gene duplication in primate ribonuclease genes.

Authors:  J Zhang; H F Rosenberg; M Nei
Journal:  Proc Natl Acad Sci U S A       Date:  1998-03-31       Impact factor: 11.205

7.  Enhanced expression of the eosinophil-derived neurotoxin ribonuclease (RNS2) gene requires interaction between the promoter and intron.

Authors:  H L Tiffany; J S Handen; H F Rosenberg
Journal:  J Biol Chem       Date:  1996-05-24       Impact factor: 5.157

8.  Molecular cloning and characterization of a novel human ribonuclease (RNase k6): increasing diversity in the enlarging ribonuclease gene family.

Authors:  H F Rosenberg; K D Dyer
Journal:  Nucleic Acids Res       Date:  1996-09-15       Impact factor: 16.971

9.  Angiogenins: a new class of microbicidal proteins involved in innate immunity.

Authors:  Lora V Hooper; Thaddeus S Stappenbeck; Chieu V Hong; Jeffrey I Gordon
Journal:  Nat Immunol       Date:  2003-01-27       Impact factor: 25.606

10.  Rapid evolution of a unique family of primate ribonuclease genes.

Authors:  H F Rosenberg; K D Dyer; H L Tiffany; M Gonzalez
Journal:  Nat Genet       Date:  1995-06       Impact factor: 38.330

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  8 in total

1.  Comparative induction of 28S ribosomal RNA cleavage by ricin and the trichothecenes deoxynivalenol and T-2 toxin in the macrophage.

Authors:  Maoxiang Li; James J Pestka
Journal:  Toxicol Sci       Date:  2008-06-04       Impact factor: 4.849

2.  The porcine ANG, RNASE1 and RNASE6 genes: molecular cloning, polymorphism detection and the association with haematological parameters.

Authors:  Xue Bai; Zian Liang; Shuhong Zhao; Xiangdong Liu; Mengjin Zhu; Zhenfang Wu; Mei Yu
Journal:  Mol Biol Rep       Date:  2009-02-27       Impact factor: 2.316

3.  Expression and function of human ribonuclease 4 in the kidney and urinary tract.

Authors:  Kristin Bender; Laura L Schwartz; Ariel Cohen; Claudia Mosquera Vasquez; Matthew J Murtha; Tad Eichler; Jason P Thomas; Ashley Jackson; John David Spencer
Journal:  Am J Physiol Renal Physiol       Date:  2021-04-05

4.  The mouse RNase 4 and RNase 5/ang 1 locus utilizes dual promoters for tissue-specific expression.

Authors:  Kimberly D Dyer; Helene F Rosenberg
Journal:  Nucleic Acids Res       Date:  2005-02-18       Impact factor: 16.971

5.  The first crystal structure of human RNase 6 reveals a novel substrate-binding and cleavage site arrangement.

Authors:  Guillem Prats-Ejarque; Javier Arranz-Trullén; Jose A Blanco; David Pulido; M Victòria Nogués; Mohammed Moussaoui; Ester Boix
Journal:  Biochem J       Date:  2016-03-24       Impact factor: 3.857

6.  Abundance of RNase4 and RNase5 mRNA and protein in host defence related tissues and secretions in cattle.

Authors:  Sandeep K Gupta; Brendan J Haigh; Thomas T Wheeler
Journal:  Biochem Biophys Rep       Date:  2016-09-23

Review 7.  The Immunomodulatory and Antimicrobial Properties of the Vertebrate Ribonuclease A Superfamily.

Authors:  Laura Schwartz; Ariel Cohen; Jason Thomas; John David Spencer
Journal:  Vaccines (Basel)       Date:  2018-11-20

8.  Ribonucleases 6 and 7 have antimicrobial function in the human and murine urinary tract.

Authors:  Brian Becknell; Tad E Eichler; Susana Beceiro; Birong Li; Robert S Easterling; Ashley R Carpenter; Cindy L James; Kirk M McHugh; David S Hains; Santiago Partida-Sanchez; John D Spencer
Journal:  Kidney Int       Date:  2014-07-30       Impact factor: 10.612

  8 in total

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