Literature DB >> 15691654

RNA-polymerase-I-directed rDNA transcription, life and works.

Jackie Russell1, Joost C B M Zomerdijk.   

Abstract

In the extensive network of interdependent biochemical processes required for cell growth and division, there is mounting evidence that ribosomal DNA transcription by RNA polymerase I (pol I) not only drives cell growth via its direct role in production of the ribosomal RNA (rRNA) component of the protein-synthesis machinery, but that it is also crucial in determining the fate of the cell. Considerable progress has been made in recent years towards understanding both the function of components of the pol I transcription machinery and how cells accomplish the tight control of pol I transcription, balancing the supply of rRNA with demand under different growth conditions.

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Year:  2005        PMID: 15691654      PMCID: PMC3858833          DOI: 10.1016/j.tibs.2004.12.008

Source DB:  PubMed          Journal:  Trends Biochem Sci        ISSN: 0968-0004            Impact factor:   13.807


  87 in total

1.  CSB is a component of RNA pol I transcription.

Authors:  John Bradsher; Jerome Auriol; Luca Proietti de Santis; Sebastian Iben; Jean Luc Vonesch; Ingrid Grummt; Jean Marc Egly
Journal:  Mol Cell       Date:  2002-10       Impact factor: 17.970

Review 2.  The involvement of RNA in ribosome function.

Authors:  Peter B Moore; Thomas A Steitz
Journal:  Nature       Date:  2002-07-11       Impact factor: 49.962

3.  A kinetic framework for a mammalian RNA polymerase in vivo.

Authors:  Miroslav Dundr; Urs Hoffmann-Rohrer; Qiyue Hu; Ingrid Grummt; Lawrence I Rothblum; Robert D Phair; Tom Misteli
Journal:  Science       Date:  2002-11-22       Impact factor: 47.728

Review 4.  Why size matters: altering cell size.

Authors:  Leslie J Saucedo; Bruce A Edgar
Journal:  Curr Opin Genet Dev       Date:  2002-10       Impact factor: 5.578

5.  Localization of the yeast RNA polymerase I-specific subunits.

Authors:  Nicolas Bischler; Laurent Brino; Christophe Carles; Michel Riva; Herbert Tschochner; Véronique Mallouh; Patrick Schultz
Journal:  EMBO J       Date:  2002-08-01       Impact factor: 11.598

6.  The cell cycle regulatory factor TAF1 stimulates ribosomal DNA transcription by binding to the activator UBF.

Authors:  Chih-Yin Lin; JoAnn Tuan; Pierluigi Scalia; Tiffany Bui; Lucio Comai
Journal:  Curr Biol       Date:  2002-12-23       Impact factor: 10.834

7.  In exponentially growing Saccharomyces cerevisiae cells, rRNA synthesis is determined by the summed RNA polymerase I loading rate rather than by the number of active genes.

Authors:  Sarah L French; Yvonne N Osheim; Francesco Cioci; Masayasu Nomura; Ann L Beyer
Journal:  Mol Cell Biol       Date:  2003-03       Impact factor: 4.272

8.  Rrn3 phosphorylation is a regulatory checkpoint for ribosome biogenesis.

Authors:  Alice H Cavanaugh; Iwona Hirschler-Laszkiewicz; Qiyue Hu; Miroslav Dundr; Tom Smink; Tom Misteli; Lawrence I Rothblum
Journal:  J Biol Chem       Date:  2002-05-15       Impact factor: 5.157

9.  RPD3 is required for the inactivation of yeast ribosomal DNA genes in stationary phase.

Authors:  Joseph J Sandmeier; Sarah French; Yvonne Osheim; Wang L Cheung; Christopher M Gallo; Ann L Beyer; Jeffrey S Smith
Journal:  EMBO J       Date:  2002-09-16       Impact factor: 11.598

10.  Multiple interactions between RNA polymerase I, TIF-IA and TAF(I) subunits regulate preinitiation complex assembly at the ribosomal gene promoter.

Authors:  Xuejun Yuan; Jian Zhao; Hanswalter Zentgraf; Urs Hoffmann-Rohrer; Ingrid Grummt
Journal:  EMBO Rep       Date:  2002-10-22       Impact factor: 8.807

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  118 in total

1.  Nuclear-localized calcineurin homologous protein CHP1 interacts with upstream binding factor and inhibits ribosomal RNA synthesis.

Authors:  Maite Jiménez-Vidal; Jyoti Srivastava; Luanna K Putney; Diane L Barber
Journal:  J Biol Chem       Date:  2010-08-18       Impact factor: 5.157

2.  Cytoskeletal protein filamin A is a nucleolar protein that suppresses ribosomal RNA gene transcription.

Authors:  Wensheng Deng; Cesar Lopez-Camacho; Jen-Yang Tang; Daniel Mendoza-Villanueva; Apolinar Maya-Mendoza; Dean A Jackson; Paul Shore
Journal:  Proc Natl Acad Sci U S A       Date:  2012-01-17       Impact factor: 11.205

3.  RNA polymerase II elongation factors Spt4p and Spt5p play roles in transcription elongation by RNA polymerase I and rRNA processing.

Authors:  D A Schneider; S L French; Y N Osheim; A O Bailey; L Vu; J Dodd; J R Yates; A L Beyer; M Nomura
Journal:  Proc Natl Acad Sci U S A       Date:  2006-08-14       Impact factor: 11.205

4.  UBF activates RNA polymerase I transcription by stimulating promoter escape.

Authors:  Kostya I Panov; J Karsten Friedrich; Jackie Russell; Joost C B M Zomerdijk
Journal:  EMBO J       Date:  2006-07-06       Impact factor: 11.598

Review 5.  rRNA gene silencing and nucleolar dominance: insights into a chromosome-scale epigenetic on/off switch.

Authors:  Sasha Preuss; Craig S Pikaard
Journal:  Biochim Biophys Acta       Date:  2007-03-12

6.  A novel TBP-associated factor of SL1 functions in RNA polymerase I transcription.

Authors:  Julia J Gorski; Shalini Pathak; Kostya Panov; Taciana Kasciukovic; Tanya Panova; Jackie Russell; Joost C B M Zomerdijk
Journal:  EMBO J       Date:  2007-02-22       Impact factor: 11.598

Review 7.  Ribosome Biogenesis in Plants: From Functional 45S Ribosomal DNA Organization to Ribosome Assembly Factors.

Authors:  Julio Sáez-Vásquez; Michel Delseny
Journal:  Plant Cell       Date:  2019-06-25       Impact factor: 11.277

8.  Myeloma cells contain high levels of inorganic polyphosphate which is associated with nucleolar transcription.

Authors:  Maria D Jimenez-Nuñez; David Moreno-Sanchez; Laura Hernandez-Ruiz; Alicia Benítez-Rondán; Ana Ramos-Amaya; Beatriz Rodríguez-Bayona; Francisco Medina; José Antonio Brieva; Felix A Ruiz
Journal:  Haematologica       Date:  2012-02-07       Impact factor: 9.941

9.  Multifunctional class I transcription in Trypanosoma brucei depends on a novel protein complex.

Authors:  Jens Brandenburg; Bernd Schimanski; Everson Nogoceke; Tu N Nguyen; Júlio C Padovan; Brian T Chait; George A M Cross; Arthur Günzl
Journal:  EMBO J       Date:  2007-11-01       Impact factor: 11.598

10.  Involvement of SIRT7 in resumption of rDNA transcription at the exit from mitosis.

Authors:  Alice Grob; Pascal Roussel; Jane E Wright; Brian McStay; Danièle Hernandez-Verdun; Valentina Sirri
Journal:  J Cell Sci       Date:  2009-01-27       Impact factor: 5.285

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