Literature DB >> 15681645

A model-independent algorithm to derive Ca2+ fluxes underlying local cytosolic Ca2+ transients.

Alejandra C Ventura1, Luciana Bruno, Angelo Demuro, Ian Parker, Silvina Ponce Dawson.   

Abstract

Local intracellular Ca(2+) signals result from Ca(2+) flux into the cytosol through individual channels or clusters of channels. To gain a mechanistic understanding of these events we need to know the magnitude and spatial distribution of the underlying Ca(2+) flux. However, this is difficult to infer from fluorescence Ca(2+) images because the distribution of Ca(2+)-bound dye is affected by poorly characterized processes including diffusion of Ca(2+) ions, their binding to mobile and immobile buffers, and sequestration by Ca(2+) pumps. Several methods have previously been proposed to derive Ca(2+) flux from fluorescence images, but all require explicit knowledge or assumptions regarding these processes. We now present a novel algorithm that requires few assumptions and is largely model-independent. By testing the algorithm with both numerically generated image data and experimental images of sparklets resulting from Ca(2+) flux through individual voltage-gated channels, we show that it satisfactorily reconstructs the magnitude and time course of the underlying Ca(2+) currents.

Entities:  

Mesh:

Substances:

Year:  2005        PMID: 15681645      PMCID: PMC1305340          DOI: 10.1529/biophysj.104.045260

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  21 in total

Review 1.  Initiation and termination of calcium sparks in skeletal muscle

Authors:  Eduardo Ríos; Gustavo Brum
Journal:  Front Biosci       Date:  2002-05-01

2.  Imaging the activity and localization of single voltage-gated Ca(2+) channels by total internal reflection fluorescence microscopy.

Authors:  Angelo Demuro; Ian Parker
Journal:  Biophys J       Date:  2004-05       Impact factor: 4.033

3.  A simple numerical model of calcium spark formation and detection in cardiac myocytes.

Authors:  G D Smith; J E Keizer; M D Stern; W J Lederer; H Cheng
Journal:  Biophys J       Date:  1998-07       Impact factor: 4.033

4.  Reconstruction of vector fields: The case of the Lorenz system.

Authors: 
Journal:  Phys Rev A       Date:  1992-08-15       Impact factor: 3.140

5.  A continuum of InsP3-mediated elementary Ca2+ signalling events in Xenopus oocytes.

Authors:  X P Sun; N Callamaras; J S Marchant; I Parker
Journal:  J Physiol       Date:  1998-05-15       Impact factor: 5.182

6.  Identification of functionally distinct isoforms of the N-type Ca2+ channel in rat sympathetic ganglia and brain.

Authors:  Z Lin; S Haus; J Edgerton; D Lipscombe
Journal:  Neuron       Date:  1997-01       Impact factor: 17.173

7.  Sarcoplasmic reticulum Ca2+ release flux underlying Ca2+ sparks in cardiac muscle.

Authors:  L A Blatter; J Hüser; E Ríos
Journal:  Proc Natl Acad Sci U S A       Date:  1997-04-15       Impact factor: 11.205

8.  Calcium release flux underlying Ca2+ sparks of frog skeletal muscle.

Authors:  E Ríos; M D Stern; A González; G Pizarro; N Shirokova
Journal:  J Gen Physiol       Date:  1999-07       Impact factor: 4.086

9.  Effects of rapid buffers on Ca2+ diffusion and Ca2+ oscillations.

Authors:  J Wagner; J Keizer
Journal:  Biophys J       Date:  1994-07       Impact factor: 4.033

10.  Quantal puffs of intracellular Ca2+ evoked by inositol trisphosphate in Xenopus oocytes.

Authors:  Y Yao; J Choi; I Parker
Journal:  J Physiol       Date:  1995-02-01       Impact factor: 5.182

View more
  11 in total

1.  The number and spatial distribution of IP3 receptors underlying calcium puffs in Xenopus oocytes.

Authors:  Jianwei Shuai; Heather J Rose; Ian Parker
Journal:  Biophys J       Date:  2006-09-15       Impact factor: 4.033

Review 2.  Imaging single-channel calcium microdomains.

Authors:  Angelo Demuro; Ian Parker
Journal:  Cell Calcium       Date:  2006-10-25       Impact factor: 6.817

3.  Analysis of puff dynamics in oocytes: interdependence of puff amplitude and interpuff interval.

Authors:  Daniel Fraiman; Bernardo Pando; Sheila Dargan; Ian Parker; Silvina Ponce Dawson
Journal:  Biophys J       Date:  2006-03-13       Impact factor: 4.033

4.  Multi-dimensional resolution of elementary Ca2+ signals by simultaneous multi-focal imaging.

Authors:  Angelo Demuro; Ian Parker
Journal:  Cell Calcium       Date:  2007-08-22       Impact factor: 6.817

5.  Inverse problems in neuronal calcium signaling.

Authors:  Jay Raol; Steven J Cox
Journal:  J Math Biol       Date:  2013-07       Impact factor: 2.259

6.  High rates of calcium-free diffusion in the cytosol of living cells.

Authors:  Cecilia Villarruel; Pablo S Aguilar; Silvina Ponce Dawson
Journal:  Biophys J       Date:  2021-08-26       Impact factor: 3.699

7.  Recording single-channel activity of inositol trisphosphate receptors in intact cells with a microscope, not a patch clamp.

Authors:  Ian Parker; Ian F Smith
Journal:  J Gen Physiol       Date:  2010-08       Impact factor: 4.086

8.  Quantifying calcium fluxes underlying calcium puffs in Xenopus laevis oocytes.

Authors:  Luciana Bruno; Guillermo Solovey; Alejandra C Ventura; Sheila Dargan; Silvina Ponce Dawson
Journal:  Cell Calcium       Date:  2010-01-25       Impact factor: 6.817

9.  Mean field strategies induce unrealistic non-linearities in calcium puffs.

Authors:  Guillermo Solovey; Daniel Fraiman; Silvina Ponce Dawson
Journal:  Front Physiol       Date:  2011-08-01       Impact factor: 4.566

10.  "Optical patch-clamping": single-channel recording by imaging Ca2+ flux through individual muscle acetylcholine receptor channels.

Authors:  Angelo Demuro; Ian Parker
Journal:  J Gen Physiol       Date:  2005-08-15       Impact factor: 4.086

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.