Literature DB >> 15681162

Rapid genotypic detection of Bacillus anthracis and the Bacillus cereus group by multiplex real-time PCR melting curve analysis.

Kijeong Kim1, Juwon Seo, Katherine Wheeler, Chulmin Park, Daewhan Kim, Seungjoon Park, Wonyong Kim, Sang-In Chung, Terrance Leighton.   

Abstract

Bacillus anthracis has four plasmid possible virulence genotypes: pXO1+/pXO2+, pXO1+/pXO2-, pXO1-/pXO2+ or pXO1-/pXO2-. Due to the lack of a specific chromosomal marker for B. anthracis, differentiation of the pXO1-/pXO2- form of B. anthracis from closely related Bacillus cereus group species is difficult. In this study, we evaluate the ability of sspE, pXO1 and pXO2 primers to discriminate individual B. anthracis and the B. cereus group genotypes using multiplex real-time PCR and melting curve analysis. Optimal conditions for successful multiplex assays have been established. Purified DNAs from 38 bacterial strains including 11 strains of B. anthracis and 18 B. cereus group strains were analyzed. Nine of the B. cereus group near-neighbor strains were shown by multilocus sequence typing to be phylogenetically proximate to the B. anthracis clade. We have demonstrated that the four plasmid genotypes of B. anthracis and B. cereus group near-neighbors were differentially and simultaneously discriminated by this assay.

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Year:  2005        PMID: 15681162     DOI: 10.1016/j.femsim.2004.10.005

Source DB:  PubMed          Journal:  FEMS Immunol Med Microbiol        ISSN: 0928-8244


  15 in total

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Authors:  Bruce Budowle; Jodi A Beaudry; Neel G Barnaby; Alan M Giusti; Jason D Bannan; Paul Keim
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2.  Multiplex PCR for species-level identification of Bacillus anthracis and detection of pXO1, pXO2, and related plasmids.

Authors:  Marco A Riojas; Katalin Kiss; Marian L McKee; Manzour Hernando Hazbón
Journal:  Health Secur       Date:  2015-03-20

3.  Existence of separate domains in lysin PlyG for recognizing Bacillus anthracis spores and vegetative cells.

Authors:  Hang Yang; Dian-Bing Wang; Qiuhua Dong; Zhiping Zhang; Zongqiang Cui; Jiaoyu Deng; Junping Yu; Xian-En Zhang; Hongping Wei
Journal:  Antimicrob Agents Chemother       Date:  2012-07-16       Impact factor: 5.191

4.  Amyloid histology stain for rapid bacterial endospore imaging.

Authors:  Bing Xia; Srigokul Upadhyayula; Vicente Nuñez; Pavel Landsman; Samuel Lam; Harbani Malik; Sharad Gupta; Mohammad Sarshar; Jingqiu Hu; Bahman Anvari; Guilford Jones; Valentine I Vullev
Journal:  J Clin Microbiol       Date:  2011-06-08       Impact factor: 5.948

5.  In silico and in vitro evaluation of PCR-based assays for the detection of Bacillus anthracis chromosomal signature sequences.

Authors:  Joakim Ågren; Raditijo A Hamidjaja; Trine Hansen; Robin Ruuls; Simon Thierry; Håkan Vigre; Ingmar Janse; Anders Sundström; Bo Segerman; Miriam Koene; Charlotta Löfström; Bart Van Rotterdam; Sylviane Derzelle
Journal:  Virulence       Date:  2013-09-09       Impact factor: 5.882

6.  Environmental factors determining the epidemiology and population genetic structure of the Bacillus cereus group in the field.

Authors:  Ben Raymond; Kelly L Wyres; Samuel K Sheppard; Richard J Ellis; Michael B Bonsall
Journal:  PLoS Pathog       Date:  2010-05-20       Impact factor: 6.823

7.  Testing and validation of high density resequencing microarray for broad range biothreat agents detection.

Authors:  Tomasz A Leski; Baochuan Lin; Anthony P Malanoski; Zheng Wang; Nina C Long; Carolyn E Meador; Brian Barrows; Sofi Ibrahim; Justin P Hardick; Mohamed Aitichou; Joel M Schnur; Clark Tibbetts; David A Stenger
Journal:  PLoS One       Date:  2009-08-11       Impact factor: 3.240

8.  Implications of limits of detection of various methods for Bacillus anthracis in computing risks to human health.

Authors:  Amanda B Herzog; S Devin McLennan; Alok K Pandey; Charles P Gerba; Charles N Haas; Joan B Rose; Syed A Hashsham
Journal:  Appl Environ Microbiol       Date:  2009-07-31       Impact factor: 4.792

9.  Reliable detection of Bacillus anthracis, Francisella tularensis and Yersinia pestis by using multiplex qPCR including internal controls for nucleic acid extraction and amplification.

Authors:  Ingmar Janse; Raditijo A Hamidjaja; Jasper M Bok; Bart J van Rotterdam
Journal:  BMC Microbiol       Date:  2010-12-08       Impact factor: 3.605

10.  The Bacillus anthracis chromosome contains four conserved, excision-proficient, putative prophages.

Authors:  Shanmuga Sozhamannan; Michael D Chute; Farrell D McAfee; Derrick E Fouts; Arya Akmal; Darrell R Galloway; Alfred Mateczun; Leslie W Baillie; Timothy D Read
Journal:  BMC Microbiol       Date:  2006-04-06       Impact factor: 3.605

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