Literature DB >> 15680587

Multistage isothermic sequencing by hybridization.

Jacek Błazewicz1, Piotr Formanowicz.   

Abstract

Despite the impressive progress in many areas of biological sciences reading DNA sequences still remains one of the most important problems. One of the methods of DNA sequencing is sequencing by hybridization which is composed of two stages--the biochemical one and the computational one. Although this method is quite modern it suffers sensitivity to errors appearing in the biochemical stage. This is a motivation for developing some new variants of the method which should be more resistant to errors of these types. Two of such non-standard approaches are multistage and isothermic sequencing by hybridization. Each of the methods is less sensitive to some types of the errors appearing in the biochemical stage, in comparison to the standard version of the method, but on the other hand, they are more sensitive to remaining types of errors. However, a combination of the two approaches reduces the sensitivity of the components.

Mesh:

Year:  2005        PMID: 15680587     DOI: 10.1016/j.compbiolchem.2004.12.001

Source DB:  PubMed          Journal:  Comput Biol Chem        ISSN: 1476-9271            Impact factor:   2.877


  1 in total

1.  An Algorithm for Sequencing by Hybridization Based on an Alternating DNA Chip.

Authors:  Marcin Radom; Piotr Formanowicz
Journal:  Interdiscip Sci       Date:  2017-02-28       Impact factor: 2.233

  1 in total

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