Literature DB >> 15678336

Differentially expressed genes associated with dormancy or germination of Arabidopsis thaliana seeds.

Peter E Toorop1, Rosa Maria Barroco, Gilbert Engler, Steven P C Groot, Henk W M Hilhorst.   

Abstract

Differential display analysis using dormant and non-dormant Arabidopsis thaliana (L.) Heynh seeds resulted in a set of genes that were associated with either dormancy or germination. Expression of the germination-associated genes AtRPL36B and AtRPL27B, encoding two ribosomal proteins, was undetectable in the dry seed, low in dormant seed, and high under conditions that allowed completion of germination. Expression of these genes was also found to be light-regulated and to correlate with germination speed. Expression of the dormancy-associated genes ATS2 and ATS4, encoding a caleosin-like protein and a protein similar to a low-temperature-induced protein respectively, was high in the dry seed and decreased during germination. Expression of ATS2 and ATS4 was high in primary and secondary dormant seed but low in after-ripened or chilled seed. The expression of both genes was also light-regulated, but no relationship with temperature-dependent germination speed was found.

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Year:  2005        PMID: 15678336     DOI: 10.1007/s00425-004-1477-1

Source DB:  PubMed          Journal:  Planta        ISSN: 0032-0935            Impact factor:   4.116


  20 in total

1.  Synthesis of ribosomal proteins from stored mRNAs early in seed germination.

Authors:  E Beltrán-Peña; A Ortíz-López; E Sánchez de Jiménez
Journal:  Plant Mol Biol       Date:  1995-05       Impact factor: 4.076

2.  Cloning and secondary structure analysis of caleosin, a unique calcium-binding protein in oil bodies of plant seeds.

Authors:  J C Chen; C C Tsai; J T Tzen
Journal:  Plant Cell Physiol       Date:  1999-10       Impact factor: 4.927

3.  The organization of cytoplasmic ribosomal protein genes in the Arabidopsis genome.

Authors:  A Barakat; K Szick-Miranda; I F Chang; R Guyot; G Blanc; R Cooke; M Delseny; J Bailey-Serres
Journal:  Plant Physiol       Date:  2001-10       Impact factor: 8.340

4.  Characterization of cDNA clones for differentially expressed genes in embryos of dormant and nondormant Avena fatua L. caryopses.

Authors:  R R Johnson; H J Cranston; M E Chaverra; W E Dyer
Journal:  Plant Mol Biol       Date:  1995-04       Impact factor: 4.076

5.  ATS1 and ATS3: two novel embryo-specific genes in Arabidopsis thaliana.

Authors:  M L Nuccio; T L Thomas
Journal:  Plant Mol Biol       Date:  1999-04       Impact factor: 4.076

6.  The abscisic acid-responsive kinase PKABA1 interacts with a seed-specific abscisic acid response element-binding factor, TaABF, and phosphorylates TaABF peptide sequences.

Authors:  Russell R Johnson; Ryan L Wagner; Steven D Verhey; Mary K Walker-Simmons
Journal:  Plant Physiol       Date:  2002-10       Impact factor: 8.340

7.  Expression of a GALACTINOL SYNTHASE gene in tomato seeds is up-regulated before maturation desiccation and again after imbibition whenever radicle protrusion is prevented.

Authors:  Bruce Downie; Sunitha Gurusinghe; Petambar Dahal; Richard R Thacker; John C Snyder; Hiroyuki Nonogaki; Kyuock Yim; Keith Fukanaga; Veria Alvarado; Kent J Bradford
Journal:  Plant Physiol       Date:  2003-03       Impact factor: 8.340

8.  Characterization of the expression of a desiccation-responsive rd29 gene of Arabidopsis thaliana and analysis of its promoter in transgenic plants.

Authors:  K Yamaguchi-Shinozaki; K Shinozaki
Journal:  Mol Gen Genet       Date:  1993-01

9.  A modified hot borate method significantly enhances the yield of high-quality RNA from cotton (Gossypium hirsutum L.).

Authors:  C Y Wan; T A Wilkins
Journal:  Anal Biochem       Date:  1994-11-15       Impact factor: 3.365

10.  Separate signal pathways regulate the expression of a low-temperature-induced gene in Arabidopsis thaliana (L.) Heynh.

Authors:  K Nordin; P Heino; E T Palva
Journal:  Plant Mol Biol       Date:  1991-06       Impact factor: 4.076

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  14 in total

1.  Co-adaptation of seed dormancy and flowering time in the arable weed Capsella bursa-pastoris (shepherd's purse).

Authors:  Peter E Toorop; Rafael Campos Cuerva; Graham S Begg; Bruna Locardi; Geoff R Squire; Pietro P M Iannetta
Journal:  Ann Bot       Date:  2011-12-05       Impact factor: 4.357

Review 2.  The dynamic roles of intracellular lipid droplets: from archaea to mammals.

Authors:  Denis J Murphy
Journal:  Protoplasma       Date:  2011-10-15       Impact factor: 3.356

3.  D-type cyclins activate division in the root apex to promote seed germination in Arabidopsis.

Authors:  Nompumelelo H Masubelele; Walter Dewitte; Margit Menges; Spencer Maughan; Carl Collins; Rachael Huntley; Jeroen Nieuwland; Simon Scofield; James A H Murray
Journal:  Proc Natl Acad Sci U S A       Date:  2005-10-14       Impact factor: 11.205

4.  Isolation of Zn-responsive genes from two accessions of the hyperaccumulator plant Thlaspi caerulescens.

Authors:  V H Hassinen; A I Tervahauta; P Halimaa; M Plessl; S Peräniemi; H Schat; M G M Aarts; K Servomaa; S O Kärenlampi
Journal:  Planta       Date:  2007-03       Impact factor: 4.116

5.  Unique and contrasting effects of light and temperature cues on plant transcriptional programs.

Authors:  Mai Jarad; Rea Antoniou-Kourounioti; Jo Hepworth; Julia I Qüesta
Journal:  Transcription       Date:  2020-10-04

6.  Identification, duplication, evolution and expression analyses of caleosins in Brassica plants and Arabidopsis subspecies.

Authors:  Yue Shen; Mingzhe Liu; Lili Wang; Zhuowei Li; David C Taylor; Zhixi Li; Meng Zhang
Journal:  Mol Genet Genomics       Date:  2016-01-19       Impact factor: 3.291

7.  Gene expression profiling reveals defined functions of the ATP-binding cassette transporter COMATOSE late in phase II of germination.

Authors:  Esther Carrera; Tara Holman; Anne Medhurst; Wendy Peer; Heike Schmuths; Steven Footitt; Frederica L Theodoulou; Michael J Holdsworth
Journal:  Plant Physiol       Date:  2007-02-23       Impact factor: 8.340

8.  The absence of histone H2B monoubiquitination in the Arabidopsis hub1 (rdo4) mutant reveals a role for chromatin remodeling in seed dormancy.

Authors:  Yongxiu Liu; Maarten Koornneef; Wim J J Soppe
Journal:  Plant Cell       Date:  2007-02-28       Impact factor: 11.277

9.  ABA-insensitive3, ABA-insensitive5, and DELLAs Interact to activate the expression of SOMNUS and other high-temperature-inducible genes in imbibed seeds in Arabidopsis.

Authors:  Soohwan Lim; Jeongmoo Park; Nayoung Lee; Jinkil Jeong; Shigeo Toh; Asuka Watanabe; Junghyun Kim; Hyojin Kang; Dong Hwan Kim; Naoto Kawakami; Giltsu Choi
Journal:  Plant Cell       Date:  2013-12-10       Impact factor: 11.277

10.  Mining genes involved in the stratification of Paris polyphylla seeds using high-throughput embryo transcriptome sequencing.

Authors:  Jianjun Qi; Na Zheng; Bing Zhang; Peng Sun; Songnian Hu; Wenjuan Xu; Qin Ma; Tingzhou Zhao; Lili Zhou; Mingjian Qin; Xianen Li
Journal:  BMC Genomics       Date:  2013-05-29       Impact factor: 3.969

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