Literature DB >> 15671178

Hydrogen and bioenergetics in the Yellowstone geothermal ecosystem.

John R Spear1, Jeffrey J Walker, Thomas M McCollom, Norman R Pace.   

Abstract

The geochemical energy budgets for high-temperature microbial ecosystems such as occur at Yellowstone National Park have been unclear. To address the relative contributions of different geochemistries to the energy demands of these ecosystems, we draw together three lines of inference. We studied the phylogenetic compositions of high-temperature (>70 degrees C) communities in Yellowstone hot springs with distinct chemistries, conducted parallel chemical analyses, and carried out thermodynamic modeling. Results of extensive molecular analyses, taken with previous results, show that most microbial biomass in these systems, as reflected by rRNA gene abundance, is comprised of organisms of the kinds that derive energy for primary productivity from the oxidation of molecular hydrogen, H2. The apparent dominance by H2-metabolizing organisms indicates that H2 is the main source of energy for primary production in the Yellowstone high-temperature ecosystem. Hydrogen concentrations in the hot springs were measured and found to range up to >300 nM, consistent with this hypothesis. Thermodynamic modeling with environmental concentrations of potential energy sources also is consistent with the proposed microaerophilic, hydrogen-based energy economy for this geothermal ecosystem, even in the presence of high concentrations of sulfide.

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Year:  2005        PMID: 15671178      PMCID: PMC548998          DOI: 10.1073/pnas.0409574102

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  37 in total

1.  Influence of sulfide and temperature on species composition and community structure of hot spring microbial mats.

Authors:  S Skirnisdottir; G O Hreggvidsson; S Hjörleifsdottir; V T Marteinsson; S K Petursdottir; O Holst; J K Kristjansson
Journal:  Appl Environ Microbiol       Date:  2000-07       Impact factor: 4.792

2.  The microbial community composition of a nitrifying-denitrifying activated sludge from an industrial sewage treatment plant analyzed by the full-cycle rRNA approach.

Authors:  Stefan Juretschko; Alexander Loy; Angelika Lehner; Michael Wagner
Journal:  Syst Appl Microbiol       Date:  2002-04       Impact factor: 4.022

3.  Culture-independent molecular analysis of microbial constituents of the healthy human outer ear.

Authors:  Daniel N Frank; George B Spiegelman; William Davis; Eileen Wagner; Eric Lyons; Norman R Pace
Journal:  J Clin Microbiol       Date:  2003-01       Impact factor: 5.948

4.  Geographical isolation in hot spring cyanobacteria.

Authors:  R Thane Papke; Niels B Ramsing; Mary M Bateson; David M Ward
Journal:  Environ Microbiol       Date:  2003-08       Impact factor: 5.491

5.  Minimum threshold for hydrogen metabolism in methanogenic bacteria.

Authors:  D R Lovley
Journal:  Appl Environ Microbiol       Date:  1985-06       Impact factor: 4.792

6.  Bias and artifacts in multitemplate polymerase chain reactions (PCR).

Authors:  Takahiro Kanagawa
Journal:  J Biosci Bioeng       Date:  2003       Impact factor: 2.894

7.  Remarkable archaeal diversity detected in a Yellowstone National Park hot spring environment.

Authors:  S M Barns; R E Fundyga; M W Jeffries; N R Pace
Journal:  Proc Natl Acad Sci U S A       Date:  1994-03-01       Impact factor: 11.205

Review 8.  Impact of culture-independent studies on the emerging phylogenetic view of bacterial diversity.

Authors:  P Hugenholtz; B M Goebel; N R Pace
Journal:  J Bacteriol       Date:  1998-09       Impact factor: 3.490

9.  Arsenite-oxidizing Hydrogenobaculum strain isolated from an acid-sulfate-chloride geothermal spring in Yellowstone National Park.

Authors:  Jessica Donahoe-Christiansen; Seth D'Imperio; Colin R Jackson; William P Inskeep; Timothy R McDermott
Journal:  Appl Environ Microbiol       Date:  2004-03       Impact factor: 4.792

10.  Phylogenetic position of the genus Hydrogenobacter.

Authors:  C Pitulle; Y Yang; M Marchiani; E R Moore; J L Siefert; M Aragno; P Jurtshuk; G E Fox
Journal:  Int J Syst Bacteriol       Date:  1994-10
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  112 in total

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Authors:  Andrey V Mardanov; Vadim M Gumerov; Alexey V Beletsky; Anna A Perevalova; Gennady A Karpov; Elizaveta A Bonch-Osmolovskaya; Nikolai V Ravin
Journal:  Extremophiles       Date:  2011-04-22       Impact factor: 2.395

2.  Phototrophic phylotypes dominate mesothermal microbial mats associated with hot springs in Yellowstone National Park.

Authors:  Kimberly A Ross; Leah M Feazel; Charles E Robertson; Babu Z Fathepure; Katherine E Wright; Rebecca M Turk-Macleod; Mallory M Chan; Nicole L Held; John R Spear; Norman R Pace
Journal:  Microb Ecol       Date:  2012-02-11       Impact factor: 4.552

3.  Microbial diversity in Tunisian geothermal springs as detected by molecular and culture-based approaches.

Authors:  Raja Sayeh; Jean Louis Birrien; Karine Alain; Georges Barbier; Mokhtar Hamdi; Daniel Prieur
Journal:  Extremophiles       Date:  2010-09-11       Impact factor: 2.395

4.  Diversity of Crenarchaeota in terrestrial hot springs in Tengchong, China.

Authors:  Zhao-Qi Song; Jing-Quan Chen; Hong-Chen Jiang; En-Min Zhou; Shu-Kun Tang; Xiao-Yang Zhi; Li-Xin Zhang; Chuan-Lun L Zhang; Wen-Jun Li
Journal:  Extremophiles       Date:  2010-04-07       Impact factor: 2.395

5.  Mercury resistance and mercuric reductase activities and expression among chemotrophic thermophilic Aquificae.

Authors:  Zachary Freedman; Chengsheng Zhu; Tamar Barkay
Journal:  Appl Environ Microbiol       Date:  2012-07-06       Impact factor: 4.792

6.  Microbial life in Bourlyashchy, the hottest thermal pool of Uzon Caldera, Kamchatka.

Authors:  Nikolay A Chernyh; Andrey V Mardanov; Vadim M Gumerov; Margarita L Miroshnichenko; Alexander V Lebedinsky; Alexander Y Merkel; Douglas Crowe; Nikolay V Pimenov; Igor I Rusanov; Nikolay V Ravin; Mary Ann Moran; Elizaveta A Bonch-Osmolovskaya
Journal:  Extremophiles       Date:  2015-09-08       Impact factor: 2.395

7.  Hydrogen and energy flow as "sensed" by molecular genetics.

Authors:  Kenneth H Nealson
Journal:  Proc Natl Acad Sci U S A       Date:  2005-03-07       Impact factor: 11.205

8.  Genomic inference of the metabolism of cosmopolitan subsurface Archaea, Hadesarchaea.

Authors:  Brett J Baker; Jimmy H Saw; Anders E Lind; Cassandre Sara Lazar; Kai-Uwe Hinrichs; Andreas P Teske; Thijs J G Ettema
Journal:  Nat Microbiol       Date:  2016-02-15       Impact factor: 17.745

9.  Subsurface microbial diversity in deep-granitic-fracture water in Colorado.

Authors:  Jason W Sahl; Raleigh Schmidt; Elizabeth D Swanner; Kevin W Mandernack; Alexis S Templeton; Thomas L Kieft; Richard L Smith; William E Sanford; Robert L Callaghan; Jeffry B Mitton; John R Spear
Journal:  Appl Environ Microbiol       Date:  2007-11-02       Impact factor: 4.792

10.  Role of 4-hydroxybutyrate-CoA synthetase in the CO2 fixation cycle in thermoacidophilic archaea.

Authors:  Aaron S Hawkins; Yejun Han; Robert K Bennett; Michael W W Adams; Robert M Kelly
Journal:  J Biol Chem       Date:  2012-12-20       Impact factor: 5.157

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