Literature DB >> 15670784

Odd-skipped related 2 splicing variants show opposite transcriptional activity.

Shinji Kawai1, Takahiro Kato, Hiroaki Inaba, Nobuo Okahashi, Atsuo Amano.   

Abstract

Odd-skipped related 2 (Osr2) is expressed in the domain of epithelial-mesenchymal interactions during tooth and kidney development. In this study, we report that alternative splicing of exon 4 resulted in two transcripts, Osr2A and Osr2B. These variants utilized a different splice acceptor, and Osr2B exhibited a frameshift followed by an early stop codon. Osr2A mRNA produced a protein that was 36 amino acids longer than Osr2B at the C-terminus and had five zinc-finger domains, whereas Osr2B had three zinc-finger motives. The 2 Osr2 variants were found in kidney, skeletal muscle, and testis, and Osr2B was predominantly transcribed in each. Flag-tagged variants showed the same localization in cell nuclei, however, Gal4 fusion proteins showed opposite transcriptional activities. Further, Flag-tagged variants also showed opposite transcriptional activities, though they were in contrast to the findings for the Gal4-fused variants. Our results indicate that Osr2 bifurcates its function by alternative splicing.

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Year:  2005        PMID: 15670784     DOI: 10.1016/j.bbrc.2004.12.173

Source DB:  PubMed          Journal:  Biochem Biophys Res Commun        ISSN: 0006-291X            Impact factor:   3.575


  10 in total

1.  Functional implications of structural predictions for alternative splice proteins expressed in Her2/neu-induced breast cancers.

Authors:  Rajasree Menon; Ambrish Roy; Srayanta Mukherjee; Saveliy Belkin; Yang Zhang; Gilbert S Omenn
Journal:  J Proteome Res       Date:  2011-10-28       Impact factor: 4.466

2.  Distinct splice variants and pathway enrichment in the cell-line models of aggressive human breast cancer subtypes.

Authors:  Rajasree Menon; Hogune Im; Emma Yue Zhang; Shiaw-Lin Wu; Rui Chen; Michael Snyder; William S Hancock; Gilbert S Omenn
Journal:  J Proteome Res       Date:  2013-11-07       Impact factor: 4.466

3.  Functional equivalence of the zinc finger transcription factors Osr1 and Osr2 in mouse development.

Authors:  Yang Gao; Yu Lan; Catherine E Ovitt; Rulang Jiang
Journal:  Dev Biol       Date:  2009-01-14       Impact factor: 3.582

Review 4.  Innovations in proteomic profiling of cancers: alternative splice variants as a new class of cancer biomarker candidates and bridging of proteomics with structural biology.

Authors:  Gilbert S Omenn; Rajasree Menon; Yang Zhang
Journal:  J Proteomics       Date:  2013-04-17       Impact factor: 4.044

5.  odd-skipped related 2 is required for fin chondrogenesis in zebrafish.

Authors:  Pui-Ying Lam; Caramai N Kamei; Steve Mangos; Sudha Mudumana; Yan Liu; Iain A Drummond
Journal:  Dev Dyn       Date:  2013-09-06       Impact factor: 3.780

6.  Functional Networks of Highest-Connected Splice Isoforms: From The Chromosome 17 Human Proteome Project.

Authors:  Hong-Dong Li; Rajasree Menon; Brandon Govindarajoo; Bharat Panwar; Yang Zhang; Gilbert S Omenn; Yuanfang Guan
Journal:  J Proteome Res       Date:  2015-08-11       Impact factor: 4.466

7.  The nephrogenic potential of the transcription factors osr1, osr2, hnf1b, lhx1 and pax8 assessed in Xenopus animal caps.

Authors:  Christiane Drews; Sabine Senkel; Gerhart U Ryffel
Journal:  BMC Dev Biol       Date:  2011-01-31       Impact factor: 1.978

8.  Functional exploration of the adult ovarian granulosa cell tumor-associated somatic FOXL2 mutation p.Cys134Trp (c.402C>G).

Authors:  Bérénice A Benayoun; Sandrine Caburet; Aurélie Dipietromaria; Adrien Georges; Barbara D'Haene; P J Eswari Pandaranayaka; David L'Hôte; Anne-Laure Todeschini; Sankaran Krishnaswamy; Marc Fellous; Elfride De Baere; Reiner A Veitia
Journal:  PLoS One       Date:  2010-01-20       Impact factor: 3.240

9.  The OSR1 rs12329305 polymorphism contributes to the development of congenital malformations in cases of stillborn/neonatal death.

Authors:  Bernarda Lozić; Vjekoslav Krželj; Ivana Kuzmić-Prusac; Radenka Kuzmanić-Šamija; Vesna Čapkun; Ružica Lasan; Tatijana Zemunik
Journal:  Med Sci Monit       Date:  2014-08-28

10.  Identification of Long Non-Coding RNAs Related to Skeletal Muscle Development in Two Rabbit Breeds with Different Growth Rate.

Authors:  Liangde Kuang; Min Lei; Congyan Li; Xiangyu Zhang; Yongjun Ren; Jie Zheng; Zhiqiang Guo; Cuixia Zhang; Chao Yang; Xiuli Mei; Min Fu; Xiaohong Xie
Journal:  Int J Mol Sci       Date:  2018-07-13       Impact factor: 5.923

  10 in total

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