Literature DB >> 15665130

Measuring forces between protein fibers by microscopy.

Christopher W Jones1, J C Wang, R W Briehl, M S Turner.   

Abstract

We propose a general scheme for measuring the attraction between mechanically frustrated semiflexible fibers by measuring their thermal fluctuations and shape. We apply this analysis to a system of sickle hemoglobin (HbS) fibers that laterally attract one another. These fibers appear to "zip" together before reaching mechanical equilibrium due to the existence of cross-links into a dilute fiber network. We are also able to estimate the rigidities of the fibers. These rigidities are found to be consistent with sickle hemoglobin "single" fibers 20 nm in diameter, despite recent experiments indicating that fiber bundling sometimes occurs. Our estimate of the magnitude of the interfiber attraction for HbS fibers is in the range 8 +/- 7 kBT/microm, or 4 +/- 3 k(B)T/microm if the fibers are assumed, a priori to be single fibers (such an assumption is fully consistent with the data). This value is sufficient to bind the fibers, overcoming entropic effects, although extremely chemically weak. Our results are compared to models for the interfiber attraction that include depletion and van der Waals forces. This technique should also facilitate a similar analysis of other filamentous protein assembles in the future, including beta-amyloid, actin, and tubulin.

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Year:  2005        PMID: 15665130      PMCID: PMC1305342          DOI: 10.1529/biophysj.104.050856

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  7 in total

1.  Micromechanics of isolated sickle cell hemoglobin fibers: bending moduli and persistence lengths.

Authors:  Jiang Cheng Wang; Matthew S Turner; Gunjan Agarwal; Suzanna Kwong; Robert Josephs; Frank A Ferrone; Robin W Briehl
Journal:  J Mol Biol       Date:  2002-01-25       Impact factor: 5.469

2.  Twisted protein aggregates and disease: the stability of sickle hemoglobin fibers.

Authors:  M S Turner; R W Briehl; F A Ferrone; R Josephs
Journal:  Phys Rev Lett       Date:  2003-03-28       Impact factor: 9.161

3.  Interactions between sickle hemoglobin fibers.

Authors:  Christopher W Jones; Jiang Cheng Wang; Frank A Ferrone; Robin W Briehl; Matthew S Turner
Journal:  Faraday Discuss       Date:  2003       Impact factor: 4.008

Review 4.  Sickle cell hemoglobin polymerization.

Authors:  W A Eaton; J Hofrichter
Journal:  Adv Protein Chem       Date:  1990

5.  Fragility and structure of hemoglobin S fibers and gels and their consequences for gelation kinetics and rheology.

Authors:  R W Briehl; A E Guzman
Journal:  Blood       Date:  1994-01-15       Impact factor: 22.113

6.  Nucleation, fiber growth and melting, and domain formation and structure in sickle cell hemoglobin gels.

Authors:  R W Briehl
Journal:  J Mol Biol       Date:  1995-02-03       Impact factor: 5.469

7.  Flexural rigidity of microtubules and actin filaments measured from thermal fluctuations in shape.

Authors:  F Gittes; B Mickey; J Nettleton; J Howard
Journal:  J Cell Biol       Date:  1993-02       Impact factor: 10.539

  7 in total
  5 in total

1.  Entropy-driven genome organization.

Authors:  Davide Marenduzzo; Cristian Micheletti; Peter R Cook
Journal:  Biophys J       Date:  2006-02-24       Impact factor: 4.033

2.  Fiber depolymerization: fracture, fragments, vanishing times, and stochastics in sickle hemoglobin.

Authors:  Jiang Cheng Wang; Suzanna Kwong; Frank A Ferrone; Matthew S Turner; Robin W Briehl
Journal:  Biophys J       Date:  2009-01       Impact factor: 4.033

3.  Dissecting the energies that stabilize sickle hemoglobin polymers.

Authors:  Yihua Wang; Frank A Ferrone
Journal:  Biophys J       Date:  2013-11-05       Impact factor: 4.033

4.  The mechanics of FtsZ fibers.

Authors:  Daniel J Turner; Ian Portman; Timothy R Dafforn; Alison Rodger; David I Roper; Corinne J Smith; Matthew S Turner
Journal:  Biophys J       Date:  2012-02-21       Impact factor: 4.033

5.  Mesoscopic Adaptive Resolution Scheme toward Understanding of Interactions between Sickle Cell Fibers.

Authors:  Lu Lu; He Li; Xin Bian; Xuejin Li; George Em Karniadakis
Journal:  Biophys J       Date:  2017-07-11       Impact factor: 4.033

  5 in total

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