Literature DB >> 15663926

Asymmetric allosteric activation of the symmetric ArgR hexamer.

Lihua Jin1, Wei-Feng Xue, June Wong Fukayama, Jaclyn Yetter, Michael Pickering, Jannette Carey.   

Abstract

Hexameric arginine repressor, ArgR, bound to L-arginine serves both as the master transcriptional repressor/activator at diverse regulons in a wide range of bacteria and as a required cofactor for resolution of ColE1 plasmid multimers. Multifunctional ArgR is thus unusual in possessing features of specific gene regulators, global regulators, and non-specific gene organizers; its closest functional analog is probably CAP, the cyclic AMP receptor/activator protein. Isothermal titration calorimetry, surface plasmon resonance, and proteolysis indicate that binding of a single L-argine [corrected] per ArgR hexamer triggers a global conformation [corrected] change and resets the affinities of the remaining five sites, making them 100-fold weaker. The analysis suggests a novel thermodynamic signature for this mechanism of activation.

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Year:  2004        PMID: 15663926     DOI: 10.1016/j.jmb.2004.11.031

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  14 in total

1.  Binding-competent states for L-arginine in E. coli arginine repressor apoprotein.

Authors:  Saurabh Kumar Pandey; David Řeha; Vasilina Zayats; Milan Melichercik; Jannette Carey; Rüdiger Ettrich
Journal:  J Mol Model       Date:  2014-06-21       Impact factor: 1.810

2.  Coxiella burnetii RpoS Regulates Genes Involved in Morphological Differentiation and Intracellular Growth.

Authors:  Derek E Moormeier; Kelsi M Sandoz; Paul A Beare; Daniel E Sturdevant; Vinod Nair; Diane C Cockrell; Heather E Miller; Robert A Heinzen
Journal:  J Bacteriol       Date:  2019-03-26       Impact factor: 3.490

3.  ArgR-regulated genes are derepressed in the Legionella-containing vacuole.

Authors:  Galadriel Hovel-Miner; Sebastien P Faucher; Xavier Charpentier; Howard A Shuman
Journal:  J Bacteriol       Date:  2010-07-09       Impact factor: 3.490

4.  Induction of holomycin production and complex metabolic changes by the argR mutation in Streptomyces clavuligerus NP1.

Authors:  Hua Yin; Sihai Xiang; Jianting Zheng; Keqiang Fan; Tingting Yu; Xu Yang; Yanfeng Peng; Haibin Wang; Deqin Feng; Yuanming Luo; Hua Bai; Keqian Yang
Journal:  Appl Environ Microbiol       Date:  2012-02-17       Impact factor: 4.792

5.  Arginine-dependent gene regulation via the ArgR repressor is species specific in chlamydia.

Authors:  Chris S Schaumburg; Ming Tan
Journal:  J Bacteriol       Date:  2006-02       Impact factor: 3.490

Review 6.  Diversity, versatility and complexity of bacterial gene regulation mechanisms: opportunities and drawbacks for applications in synthetic biology.

Authors:  Indra Bervoets; Daniel Charlier
Journal:  FEMS Microbiol Rev       Date:  2019-05-01       Impact factor: 16.408

7.  Symmetric allosteric mechanism of hexameric Escherichia coli arginine repressor exploits competition between L-arginine ligands and resident arginine residues.

Authors:  Rebecca Strawn; Milan Melichercik; Michael Green; Thomas Stockner; Jannette Carey; Rüdiger Ettrich
Journal:  PLoS Comput Biol       Date:  2010-06-03       Impact factor: 4.475

8.  Structure of the C-terminal effector-binding domain of AhrC bound to its corepressor L-arginine.

Authors:  James A Garnett; Simon Baumberg; Peter G Stockley; Simon E V Phillips
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2007-10-20

9.  A high-resolution structure of the DNA-binding domain of AhrC, the arginine repressor/activator protein from Bacillus subtilis.

Authors:  James A Garnett; Simon Baumberg; Peter G Stockley; Simon E V Phillips
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2007-10-20

10.  Catabolic Ornithine Carbamoyltransferase Activity Facilitates Growth of Staphylococcus aureus in Defined Medium Lacking Glucose and Arginine.

Authors:  Itidal Reslane; Cortney R Halsey; Amanda Stastny; Barbara J Cabrera; Jongsam Ahn; Dhananjay Shinde; Madeline R Galac; Margaret F Sladek; Fareha Razvi; McKenzie K Lehman; Kenneth W Bayles; Vinai C Thomas; Luke D Handke; Paul D Fey
Journal:  mBio       Date:  2022-04-27       Impact factor: 7.786

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