Literature DB >> 15661513

A reductionist's systems biology: opinion.

Peter K Sorger1.   

Abstract

To tackle the complexity inherent in understanding large networks of interacting biomolecules, systems biology emphasizes cybernetic and systems theoretical approaches. The resulting focus on organization independent of physical manifestation threatens to throw away all that has been learned from molecular studies and ignores the reality that biologists are drawn together more by a shared interest in mechanism and structure than anything else. The field of reaction engineering suggests a reductionist approach to systems biology that fits easily within existing molecular paradigms but that can nonetheless be integrated into expansive physiological perspectives through the use of multi-scale modeling.

Mesh:

Year:  2005        PMID: 15661513     DOI: 10.1016/j.ceb.2004.12.012

Source DB:  PubMed          Journal:  Curr Opin Cell Biol        ISSN: 0955-0674            Impact factor:   8.382


  16 in total

Review 1.  Multiplexed protein measurement: technologies and applications of protein and antibody arrays.

Authors:  Stephen F Kingsmore
Journal:  Nat Rev Drug Discov       Date:  2006-04       Impact factor: 84.694

Review 2.  Vision from next generation sequencing: multi-dimensional genome-wide analysis for producing gene regulatory networks underlying retinal development, aging and disease.

Authors:  Hyun-Jin Yang; Rinki Ratnapriya; Tiziana Cogliati; Jung-Woong Kim; Anand Swaroop
Journal:  Prog Retin Eye Res       Date:  2015-02-07       Impact factor: 21.198

Review 3.  Understanding diseases by mouse click: the promise and potential of computational approaches in Systems Biology.

Authors:  F Klauschen; B R Angermann; M Meier-Schellersheim
Journal:  Clin Exp Immunol       Date:  2007-07-30       Impact factor: 4.330

4.  Systemic darwinism.

Authors:  Rasmus Grønfeldt Winther
Journal:  Proc Natl Acad Sci U S A       Date:  2008-08-12       Impact factor: 11.205

Review 5.  Redox Systems Biology: Harnessing the Sentinels of the Cysteine Redoxome.

Authors:  Jason M Held
Journal:  Antioxid Redox Signal       Date:  2019-09-09       Impact factor: 8.401

6.  Phosphatase specificity and pathway insulation in signaling networks.

Authors:  Michael A Rowland; Brian Harrison; Eric J Deeds
Journal:  Biophys J       Date:  2015-02-17       Impact factor: 4.033

7.  TNF-insulin crosstalk at the transcription factor GATA6 is revealed by a model that links signaling and transcriptomic data tensors.

Authors:  Zeinab Chitforoushzadeh; Zi Ye; Ziran Sheng; Silvia LaRue; Rebecca C Fry; Douglas A Lauffenburger; Kevin A Janes
Journal:  Sci Signal       Date:  2016-06-07       Impact factor: 8.192

8.  In silico model-based inference: a contemporary approach for hypothesis testing in network biology.

Authors:  David J Klinke
Journal:  Biotechnol Prog       Date:  2014-08-26

Review 9.  So what do we really mean when we say that systems biology is holistic?

Authors:  Derek Gatherer
Journal:  BMC Syst Biol       Date:  2010-03-12

10.  Computational systems biology in cancer: modeling methods and applications.

Authors:  Wayne Materi; David S Wishart
Journal:  Gene Regul Syst Bio       Date:  2007-09-17
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.