Literature DB >> 15661352

Is abundant A-to-I RNA editing primate-specific?

Eli Eisenberg1, Sergey Nemzer, Yaron Kinar, Rotem Sorek, Gideon Rechavi, Erez Y Levanon.   

Abstract

A-to-I RNA editing is common in all eukaryotes, and is associated with various neurological functions. Recently, A-to-I editing was found to occur frequently in the human transcriptome. In this article, we show that the frequency of A-to-I editing in humans is at least an order of magnitude higher than in the mouse, rat, chicken or fly genomes. The extraordinary frequency of RNA editing in human is explained by the dominance of the primate-specific Alu element in the human transcriptome, which increases the number of double-stranded RNA substrates.

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Year:  2005        PMID: 15661352     DOI: 10.1016/j.tig.2004.12.005

Source DB:  PubMed          Journal:  Trends Genet        ISSN: 0168-9525            Impact factor:   11.639


  60 in total

Review 1.  Biological significance of RNA editing in cells.

Authors:  Wei Tang; Yongjun Fei; Michael Page
Journal:  Mol Biotechnol       Date:  2012-09       Impact factor: 2.695

Review 2.  Substitutional A-to-I RNA editing.

Authors:  Bjorn-Erik Wulff; Kazuko Nishikura
Journal:  Wiley Interdiscip Rev RNA       Date:  2010 Jul-Aug       Impact factor: 9.957

3.  RNA editing level in the mouse is determined by the genomic repeat repertoire.

Authors:  Yossef Neeman; Erez Y Levanon; Michael F Jantsch; Eli Eisenberg
Journal:  RNA       Date:  2006-08-29       Impact factor: 4.942

4.  Hypothesis: RNA editing of microRNA target sites in humans?

Authors:  Han Liang; Laura F Landweber
Journal:  RNA       Date:  2007-01-25       Impact factor: 4.942

Review 5.  The expanding transcriptome: the genome as the 'Book of Sand'.

Authors:  Luis M Mendes Soares; Juan Valcárcel
Journal:  EMBO J       Date:  2006-03-02       Impact factor: 11.598

6.  Genetic variation in the zebrafish.

Authors:  Victor Guryev; Marco J Koudijs; Eugene Berezikov; Stephen L Johnson; Ronald H A Plasterk; Fredericus J M van Eeden; Edwin Cuppen
Journal:  Genome Res       Date:  2006-03-13       Impact factor: 9.043

Review 7.  Powerful mutators lurking in the genome.

Authors:  Vincent Petit; Jean-Pierre Vartanian; Simon Wain-Hobson
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2009-03-12       Impact factor: 6.237

8.  Characterization and comparison of human nuclear and cytosolic editomes.

Authors:  Liang Chen
Journal:  Proc Natl Acad Sci U S A       Date:  2013-07-01       Impact factor: 11.205

Review 9.  Retrotransposons as regulators of gene expression.

Authors:  Reyad A Elbarbary; Bronwyn A Lucas; Lynne E Maquat
Journal:  Science       Date:  2016-02-11       Impact factor: 47.728

10.  Widespread cleavage of A-to-I hyperediting substrates.

Authors:  Sivan Osenberg; Dan Dominissini; Gideon Rechavi; Eli Eisenberg
Journal:  RNA       Date:  2009-07-21       Impact factor: 4.942

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