Literature DB >> 15653859

Planococcus stackebrandtii sp. nov., isolated from a cold desert of the Himalayas, India.

S Mayilraj1, G S Prasad1, K Suresh2, H S Saini3, S Shivaji2, T Chakrabarti1.   

Abstract

The taxonomic position of a bacterium isolated from a cold desert of the Himalayas, India, was analysed by using a polyphasic approach. The isolated strain, designated K22-03T, had phenotypic characteristics that matched those of the genus Planococcus and it represents a novel species. The almost-complete 16S rRNA gene sequence (1464 bases) of the novel strain was compared with those of previously studied Planococcus type strains and confirmed that the strain belongs to the genus Planococcus. 16S rRNA gene sequence analysis indicated that strain K22-03T differs from all other species of Planococcus by at least 2.5 %. DNA-DNA hybridization showed that it had low genomic relatedness with Planomicrobium mcmeekinii (MTCC 3704T, 23 %), Planococcus psychrophilus (MTCC 3812T, 61 %), Planococcus antarcticus (MTCC 3854T, 45 %) and Planomicrobium okeanokoites (MTCC 3703T, 51 %), the four species with which it was most closely related based on 16S rRNA gene sequence analysis (97-97.5 % similarity). Therefore, strain K22-03T should be recognized as a novel species, for which the name Planococcus stackebrandtii sp. nov. is proposed. The type strain is K22-03T (=MTCC 6226T=DSM 16419T=JCM 12481T).

Entities:  

Mesh:

Substances:

Year:  2005        PMID: 15653859     DOI: 10.1099/ijs.0.63290-0

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  6 in total

1.  Bacterial diversity of soil in the vicinity of Pindari glacier, Himalayan mountain ranges, India, using culturable bacteria and soil 16S rRNA gene clones.

Authors:  S Shivaji; M S Pratibha; B Sailaja; K Hara Kishore; Ashish K Singh; Z Begum; Uttam Anarasi; S R Prabagaran; G S N Reddy; T N R Srinivas
Journal:  Extremophiles       Date:  2011-01       Impact factor: 2.395

2.  Molecular characterization and its antioxidant activity of a newly isolated Streptomyces coelicoflavus BC 01 from mangrove soil.

Authors:  Kothagorla Venkata Raghava Rao; Tamanam Raghava Rao
Journal:  J Young Pharm       Date:  2013-12-28

3.  Cohnella ferri sp. nov. a novel member of the genus Cohnella isolated from haematite ore.

Authors:  Shanmugam Mayilraj; Arunachalam Ruckmani; Chandandeep Kaur; Ishwinder Kaur; Hans-Peter Klenk
Journal:  Curr Microbiol       Date:  2011-03-17       Impact factor: 2.188

4.  Culturable and culture-independent bacterial diversity and the prevalence of cold-adapted enzymes from the Himalayan mountain ranges of India and Nepal.

Authors:  Siddarthan Venkatachalam; Vasudevan Gowdaman; Solai Ramatchandirane Prabagaran
Journal:  Microb Ecol       Date:  2014-09-10       Impact factor: 4.552

5.  Robust Demarcation of the Family Caryophanaceae (Planococcaceae) and Its Different Genera Including Three Novel Genera Based on Phylogenomics and Highly Specific Molecular Signatures.

Authors:  Radhey S Gupta; Sudip Patel
Journal:  Front Microbiol       Date:  2020-01-14       Impact factor: 5.640

6.  Whole genome sequencing and comparative genomic analyses of Planococcus alpniumensis MSAK28401T, a new species isolated from Antarctic krill.

Authors:  Yuanyuan Wang; Lingbo Ma; Jian He; Zixuan Liu; Shaoping Weng; Lumin Wang; Jianguo He; Changjun Guo
Journal:  BMC Microbiol       Date:  2021-10-22       Impact factor: 3.605

  6 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.