Literature DB >> 15641128

New combination test for hepatitis C virus genotype and viral load determination using Amplicor GT HCV MONITOR test v2.0.

Motokazu Mukaide1, Yasuhito Tanaka, Hirokazu Kakuda, Kei Fujiwara, Fuat Kurbanov, Eturo Orito, Kentaro Yoshioka, Kiyotaka Fujise, Shoji Harada, Takazumi Kozaki, Kazuo Takemura, Kazumasa Hikiji, Masashi Mizokami.   

Abstract

AIM: To develop a new sensitive and inexpensive hepatitis C virus (HCV) combination test (HCV Guideline test) that enables the determination of HCV genotypes 1, 2 and 3, and simultaneous determination of HCV viral load using commercial Amplicor GT HCV MONITOR test v2.0 (microwell version).
METHODS: The HCV Guideline test used the PCR product generated in commercial Amplicor GT HCV Monitor test v2.0 for viral load measurement using microwell plate version of Amplicor HCV Monitor and also captured on separate plates containing capture probes and competitive oligonucleotide probes specific for HCV genotypes 1, 2 and 3, The HCV genotype was subsequently determined using the biotin-labeled PCR product and five biotin-labeled HCV-specific probes.
RESULTS: The sensitivity of the HCV Guideline test was 0.5 KIU/mL. Specificity of the HCV Guideline test was confirmed by direct sequencing of HCV core region and molecular evolutionary analyses based on a panel of 31 samples. The comparison of the HCV Guideline test and an in-house HCV core genotyping assay using 252 samples from chronic hepatitis C patients indicated concordant results for 97.2% of samples (59.5% genotype 1, 33.7% genotype 2, 6.0% genotype 3, and 0.8% mixed genotypes). Similarly, the HCV Guideline test showed concordance with a serological test, and the serological test failed to assign any serotype in 12.7% of the samples, indicating a better sensitivity of the HCV Guideline test.
CONCLUSION: Clinically, both viral load and genotypes (1, 2 and 3) have been found to be major predictors of antiviral therapy outcome regarding chronic hepatitis C based on guidelines and they are, in normal circumstances, performed as separate stand-alone assays. The HCV Guideline test is a useful method for screening large cohorts in a routine clinical setting for determining the treatment regimen and for predicting the outcome of antiviral therapy of chronic hepatitis C.

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Year:  2005        PMID: 15641128      PMCID: PMC4250793          DOI: 10.3748/wjg.v11.i4.469

Source DB:  PubMed          Journal:  World J Gastroenterol        ISSN: 1007-9327            Impact factor:   5.742


  34 in total

1.  HCV genotyping by three methods: analysis of discordant results based on sequencing.

Authors:  M Furione; L Simoncini; M Gatti; F Baldanti; M Grazia Revello; G Gerna
Journal:  J Clin Virol       Date:  1999-08       Impact factor: 3.168

2.  The neighbor-joining method: a new method for reconstructing phylogenetic trees.

Authors:  N Saitou; M Nei
Journal:  Mol Biol Evol       Date:  1987-07       Impact factor: 16.240

3.  Estimation of average number of nucleotide substitutions when the rate of substitution varies with nucleotide.

Authors:  T Gojobori; K Ishii; M Nei
Journal:  J Mol Evol       Date:  1982       Impact factor: 2.395

Review 4.  Advances in the molecular diagnosis of hepatitis C and their clinical implications.

Authors:  J J Germer; N N Zein
Journal:  Mayo Clin Proc       Date:  2001-09       Impact factor: 7.616

5.  Detection of antibody to hepatitis C virus in prospectively followed transfusion recipients with acute and chronic non-A, non-B hepatitis.

Authors:  H J Alter; R H Purcell; J W Shih; J C Melpolder; M Houghton; Q L Choo; G Kuo
Journal:  N Engl J Med       Date:  1989-11-30       Impact factor: 91.245

6.  Peginterferon alfa-2b plus ribavirin compared with interferon alfa-2b plus ribavirin for initial treatment of chronic hepatitis C: a randomised trial.

Authors:  M P Manns; J G McHutchison; S C Gordon; V K Rustgi; M Shiffman; R Reindollar; Z D Goodman; K Koury; M Ling; J K Albrecht
Journal:  Lancet       Date:  2001-09-22       Impact factor: 79.321

7.  Cost-effectiveness of treatment for chronic hepatitis C infection in an evolving patient population.

Authors:  Joshua A Salomon; Milton C Weinstein; James K Hammitt; Sue J Goldie
Journal:  JAMA       Date:  2003-07-09       Impact factor: 56.272

8.  Serum hepatitis C virus RNA level as a predictor of subsequent response to interferon-alpha therapy in Japanese patients with chronic hepatitis C.

Authors:  E Orito; M Mizokami; T Nakano; H Terashima; O Nojiri; K Sakakibara; M Mizuno; M Ogino; M Nakamura; Y Matsumoto
Journal:  J Med Virol       Date:  1994-12       Impact factor: 2.327

9.  Detection of hepatitis C virus by polymerase chain reaction and response to interferon-alpha therapy: relationship to genotypes of hepatitis C virus.

Authors:  K Yoshioka; S Kakumu; T Wakita; T Ishikawa; Y Itoh; M Takayanagi; Y Higashi; M Shibata; T Morishima
Journal:  Hepatology       Date:  1992-08       Impact factor: 17.425

10.  Rapid genotyping of hepatitis C virus RNA-isolates obtained from patients residing in western Europe.

Authors:  G E Kleter; L J van Doorn; L Stuyver; G Maertens; J T Brouwer; S W Schalm; R A Heijtink; W G Quint
Journal:  J Med Virol       Date:  1995-09       Impact factor: 2.327

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