Literature DB >> 15640085

[Genetic diversity of microsatellites (SSRs) of natural populations of Quercus variabilis].

Xiao-Lin Xu1, Li-An Xu, Min-Ren Huan, Zhang-Rong Wang.   

Abstract

Genetic diversity of five Quercus variabilis natural populations in four provinces of China was studied with microsatellite (SSR) markers. A relatively high level of genetic diversity was detected in Q. variabilis species with 16 polymorphic microsatellite loci. Average number of alleles (A) and effective number of alleles (N(e)) were 8.4375 and 5.9512 respectively. The mean expected heterozygosity (H(e)) was 0.8059 and Nei diversity index (h) was 0.8041. Higher diversity was found with the populations from the central range of the species in contrast to those from peripheral areas and human activities might decrease the genetic diversity of populations. The majority of genetic variation occurred within populations, which could be concluded from the low coefficient of genetic differentiation (F(st)=0.0455). In addition, significant correlation was found between geographical distance and genetic distance. All these results present a basis to the conservation and utilization of genetic diversity of Quercus variabilis.

Entities:  

Mesh:

Substances:

Year:  2004        PMID: 15640085

Source DB:  PubMed          Journal:  Yi Chuan        ISSN: 0253-9772


  4 in total

1.  EST-SSR marker development based on transcriptome sequencing and genetic analyses of Phoebe bournei (Lauraceae).

Authors:  Qi Zhou; Peng-Yan Zhou; Wen-Tao Zou; Yin-Gang Li
Journal:  Mol Biol Rep       Date:  2021-02-24       Impact factor: 2.316

2.  Isolation and characterization of microsatellite markers for an endemic tree in East Asia, Quercus variabilis (Fagaceae).

Authors:  Xian Wang; Jing Li; Yong Li
Journal:  Appl Plant Sci       Date:  2015-06-05       Impact factor: 1.936

3.  Hybridization and introgression in sympatric and allopatric populations of four oak species.

Authors:  Xuan Li; Gaoming Wei; Yousry A El-Kassaby; Yanming Fang
Journal:  BMC Plant Biol       Date:  2021-06-09       Impact factor: 4.215

4.  Comparative Analyses of Five Complete Chloroplast Genomes from the Genus Pterocarpus (Fabacaeae).

Authors:  Zhou Hong; Zhiqiang Wu; Kunkun Zhao; Zengjiang Yang; Ningnan Zhang; Junyu Guo; Luke R Tembrock; Daping Xu
Journal:  Int J Mol Sci       Date:  2020-05-26       Impact factor: 5.923

  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.