Literature DB >> 15637255

Orphan enzymes?

Olivier Lespinet, Bernard Labedan.   

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Year:  2005        PMID： 15637255     DOI： 10.1126/science.307.5706.42a

Source DB:  PubMed          Journal:  Science        ISSN： 0036-8075            Impact factor:   47.728


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  16 in total

1.  Revealing the hidden functional diversity of an enzyme family.

Authors:  Karine Bastard; Adam Alexander Thil Smith; Carine Vergne-Vaxelaire; Alain Perret; Anne Zaparucha; Raquel De Melo-Minardi; Aline Mariage; Magali Boutard; Adrien Debard; Christophe Lechaplais; Christine Pelle; Virginie Pellouin; Nadia Perchat; Jean-Louis Petit; Annett Kreimeyer; Claudine Medigue; Jean Weissenbach; François Artiguenave; Véronique De Berardinis; David Vallenet; Marcel Salanoubat
Journal:  Nat Chem Biol       Date:  2013-11-17       Impact factor: 15.040

2.  Optimizing genome-scale network reconstructions.

Authors:  Jonathan Monk; Juan Nogales; Bernhard O Palsson
Journal:  Nat Biotechnol       Date:  2014-05       Impact factor: 54.908

3.  Nontargeted in vitro metabolomics for high-throughput identification of novel enzymes in Escherichia coli.

Authors:  Daniel C Sévin; Tobias Fuhrer; Nicola Zamboni; Uwe Sauer
Journal:  Nat Methods       Date:  2016-12-12       Impact factor: 28.547

4.  Computational prediction and experimental verification of the gene encoding the NAD+/NADP+-dependent succinate semialdehyde dehydrogenase in Escherichia coli.

Authors:  Tobias Fuhrer; Lifeng Chen; Uwe Sauer; Dennis Vitkup
Journal:  J Bacteriol       Date:  2007-09-14       Impact factor: 3.490

5.  The human metabolic reconstruction Recon 1 directs hypotheses of novel human metabolic functions.

Authors:  Ottar Rolfsson; Bernhard Ø Palsson; Ines Thiele
Journal:  BMC Syst Biol       Date:  2011-10-01

6.  ORENZA: a web resource for studying ORphan ENZyme activities.

Authors:  Olivier Lespinet; Bernard Labedan
Journal:  BMC Bioinformatics       Date:  2006-10-06       Impact factor: 3.169

7.  High precision multi-genome scale reannotation of enzyme function by EFICAz.

Authors:  Adrian K Arakaki; Weidong Tian; Jeffrey Skolnick
Journal:  BMC Genomics       Date:  2006-12-13       Impact factor: 3.969

Review 8.  Metagenomics: tools and insights for analyzing next-generation sequencing data derived from biodiversity studies.

Authors:  Anastasis Oulas; Christina Pavloudi; Paraskevi Polymenakou; Georgios A Pavlopoulos; Nikolas Papanikolaou; Georgios Kotoulas; Christos Arvanitidis; Ioannis Iliopoulos
Journal:  Bioinform Biol Insights       Date:  2015-05-05

9.  Prediction and identification of sequences coding for orphan enzymes using genomic and metagenomic neighbours.

Authors:  Takuji Yamada; Alison S Waller; Jeroen Raes; Aleksej Zelezniak; Nadia Perchat; Alain Perret; Marcel Salanoubat; Kiran R Patil; Jean Weissenbach; Peer Bork
Journal:  Mol Syst Biol       Date:  2012-05-08       Impact factor: 11.429

10.  A survey of orphan enzyme activities.

Authors:  Yannick Pouliot; Peter D Karp
Journal:  BMC Bioinformatics       Date:  2007-07-10       Impact factor: 3.169
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