Literature DB >> 15630562

Side-chain assignments of methyl-containing residues in a uniformly 13C-labeled hemoglobin in the carbonmonoxy form.

Yu Zheng1, Janel L Giovannelli, Nancy T Ho, Chien Ho, Daiwen Yang.   

Abstract

Sequence-specific assignment of the methyl groups in large proteins can be obtained from an MQ-(H)CC(m)H(m)-TOCSY experiment on uniformly (13)C-labeled proteins without deuteration (Yang et al., 2004). Here the procedure is further demonstrated on a uniformly (13)C-labeled alpha-chain or beta-chain of human normal adult hemoglobin (65 kDa) in the carbonmonoxy form. In addition, a strategy is presented for assigning protons of methyl-containing residues of uniformly (13)C-labeled large proteins, on the basis of prior methyl assignments based on MQ-(H)CCH-TOCSY and H(C)C(m)H(m)-TOCSY experiments. Assignment of about 80% of the side-chain resonances of methyl-containing residues of carbonmonoxyhemoglobin has been obtained.

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Year:  2004        PMID: 15630562     DOI: 10.1007/s10858-004-4345-1

Source DB:  PubMed          Journal:  J Biomol NMR        ISSN: 0925-2738            Impact factor:   2.835


  15 in total

1.  Chain-selective isotopic labeling for NMR studies of large multimeric proteins: application to hemoglobin.

Authors:  V Simplaceanu; J A Lukin; T Y Fang; M Zou; N T Ho; C Ho
Journal:  Biophys J       Date:  2000-08       Impact factor: 4.033

2.  A novel strategy for the assignment of side-chain resonances in completely deuterated large proteins using 13C spectroscopy.

Authors:  Alexander Eletsky; Osvaldo Moreira; Helena Kovacs; Konstantin Pervushin
Journal:  J Biomol NMR       Date:  2003-06       Impact factor: 2.835

3.  Backbone resonance assignments of human adult hemoglobin in the carbonmonoxy form.

Authors:  Jonathan A Lukin; Georg Kontaxis; Virgil Simplaceanu; Yue Yuan; Ad Bax; Chien Ho
Journal:  J Biomol NMR       Date:  2004-02       Impact factor: 2.835

4.  Ile, Leu, and Val methyl assignments of the 723-residue malate synthase G using a new labeling strategy and novel NMR methods.

Authors:  Vitali Tugarinov; Lewis E Kay
Journal:  J Am Chem Soc       Date:  2003-11-12       Impact factor: 15.419

5.  Nuclear magnetic resonance spectroscopy in the study of hemoglobin cooperativity.

Authors:  Doug Barrick; Jonathan A Lukin; Virgil Simplaceanu; Chien Ho
Journal:  Methods Enzymol       Date:  2004       Impact factor: 1.600

Review 6.  The structure--function relationship of hemoglobin in solution at atomic resolution.

Authors:  Jonathan A Lukin; Chien Ho
Journal:  Chem Rev       Date:  2004-03       Impact factor: 60.622

Review 7.  Deuterium labelling in NMR structural analysis of larger proteins.

Authors:  D M LeMaster
Journal:  Q Rev Biophys       Date:  1990-05       Impact factor: 5.318

8.  Characterizing the use of perdeuteration in NMR studies of large proteins: 13C, 15N and 1H assignments of human carbonic anhydrase II.

Authors:  R A Venters; B T Farmer; C A Fierke; L D Spicer
Journal:  J Mol Biol       Date:  1996-12-20       Impact factor: 5.469

9.  Side chain assignments of Ile delta 1 methyl groups in high molecular weight proteins: an application to a 46 ns tumbling molecule.

Authors:  Vitali Tugarinov; Lewis E Kay
Journal:  J Am Chem Soc       Date:  2003-05-14       Impact factor: 15.419

10.  A third quaternary structure of human hemoglobin A at 1.7-A resolution.

Authors:  M M Silva; P H Rogers; A Arnone
Journal:  J Biol Chem       Date:  1992-08-25       Impact factor: 5.157

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  5 in total

1.  Observation of intermolecular interactions in large protein complexes by 2D-double difference nuclear Overhauser enhancement spectroscopy: application to the 44 kDa interferon-receptor complex.

Authors:  Ilona Nudelman; Sabine R Akabayov; Tali Scherf; Jacob Anglister
Journal:  J Am Chem Soc       Date:  2011-08-23       Impact factor: 15.419

2.  Towards unambiguous assignment of methyl-containing residues by double and triple sensitivity-enhanced HCCmHm-TOCSY experiments.

Authors:  Peter Würtz; Maarit Hellman; Helena Tossavainen; Perttu Permi
Journal:  J Biomol NMR       Date:  2006-09-09       Impact factor: 2.835

3.  Interfacial and distal-heme pocket mutations exhibit additive effects on the structure and function of hemoglobin.

Authors:  David H Maillett; Virgil Simplaceanu; Tong-Jian Shen; Nancy T Ho; John S Olson; Chien Ho
Journal:  Biochemistry       Date:  2008-09-13       Impact factor: 3.162

4.  Intermolecular interactions in a 44 kDa interferon-receptor complex detected by asymmetric reverse-protonation and two-dimensional NOESY.

Authors:  Ilona Nudelman; Sabine R Akabayov; Einat Schnur; Zohar Biron; Rina Levy; Yingqi Xu; Daiwen Yang; Jacob Anglister
Journal:  Biochemistry       Date:  2010-06-29       Impact factor: 3.162

5.  A unified scheme for initiation and conformational adaptation of human apolipoprotein E N-terminal domain upon lipoprotein binding and for receptor binding activity.

Authors:  Arun Sivashanmugam; Jianjun Wang
Journal:  J Biol Chem       Date:  2009-03-23       Impact factor: 5.157

  5 in total

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