Literature DB >> 15627378

Biochemical effects of molecular crowding.

N A Chebotareva1, B I Kurganov, N B Livanova.   

Abstract

Cell cytoplasm contains high concentrations of high-molecular-weight components that occupy a substantial part of the volume of the medium (crowding conditions). The effect of crowding on biochemical processes proceeding in the cell (conformational transitions of biomacromolecules, assembling of macromolecular structures, protein folding, protein aggregation, etc.) is discussed in this review. The excluded volume concept, which allows the effects of crowding on biochemical reactions to be quantitatively described, is considered. Experimental data demonstrating the biochemical effects of crowding imitated by both low-molecular-weight and high-molecular-weight crowding agents are summarized.

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Year:  2004        PMID: 15627378     DOI: 10.1007/s10541-005-0070-y

Source DB:  PubMed          Journal:  Biochemistry (Mosc)        ISSN: 0006-2979            Impact factor:   2.487


  41 in total

1.  Reconstitution of clathrin-coated bud and vesicle formation with minimal components.

Authors:  Philip N Dannhauser; Ernst J Ungewickell
Journal:  Nat Cell Biol       Date:  2012-04-22       Impact factor: 28.824

2.  An experimental study of GFP-based FRET, with application to intrinsically unstructured proteins.

Authors:  Tomoo Ohashi; Stephane D Galiacy; Gina Briscoe; Harold P Erickson
Journal:  Protein Sci       Date:  2007-07       Impact factor: 6.725

Review 3.  Dissociative mechanism for irreversible thermal denaturation of oligomeric proteins.

Authors:  Natalia A Chebotareva; Svetlana G Roman; Boris I Kurganov
Journal:  Biophys Rev       Date:  2016-10-17

4.  Contrasting factors on the kinetic path to protein complex formation diminish the effects of crowding agents.

Authors:  Yael Phillip; Michal Harel; Ruth Khait; Sanbo Qin; Huan-Xiang Zhou; Gideon Schreiber
Journal:  Biophys J       Date:  2012-09-05       Impact factor: 4.033

5.  Oligomerization inhibits Legionella pneumophila PlaB phospholipase A activity.

Authors:  Katja Kuhle; Joern Krausze; Ute Curth; Manfred Rössle; Klaus Heuner; Christina Lang; Antje Flieger
Journal:  J Biol Chem       Date:  2014-05-08       Impact factor: 5.157

6.  Ischemic preconditioning prevents protein aggregation after transient cerebral ischemia.

Authors:  C Liu; S Chen; F Kamme; B R Hu
Journal:  Neuroscience       Date:  2005       Impact factor: 3.590

7.  Quantifying the effects of elastic collisions and non-covalent binding on glutamate receptor trafficking in the post-synaptic density.

Authors:  Fidel Santamaria; Jossina Gonzalez; George J Augustine; Sridhar Raghavachari
Journal:  PLoS Comput Biol       Date:  2010-05-13       Impact factor: 4.475

8.  Antimicrobial mechanism of pore-forming protegrin peptides: 100 pores to kill E. coli.

Authors:  Dan Bolintineanu; Ehsan Hazrati; H Ted Davis; Robert I Lehrer; Yiannis N Kaznessis
Journal:  Peptides       Date:  2009-11-30       Impact factor: 3.750

9.  Homo-oligomerization and activation of AMP-activated protein kinase are mediated by the kinase domain alphaG-helix.

Authors:  Roland Scholz; Marianne Suter; Théodore Weimann; Cécile Polge; Petr V Konarev; Ramon F Thali; Roland D Tuerk; Benoit Viollet; Theo Wallimann; Uwe Schlattner; Dietbert Neumann
Journal:  J Biol Chem       Date:  2009-08-03       Impact factor: 5.157

10.  Isolation of cell nuclei using inert macromolecules to mimic the crowded cytoplasm.

Authors:  Ronald Hancock; Yasmina Hadj-Sahraoui
Journal:  PLoS One       Date:  2009-10-23       Impact factor: 3.240

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