Literature DB >> 15624925

Synthesis and conformational analysis of 6-C-methyl-substituted 2-acetamido-2-deoxy-beta-D-glucopyranosyl mono- and disaccharides.

Jihane Achkar1, Isabel Sanchez-Larraza, Carol A Johnson, Alexander Wei.   

Abstract

Several 6-C-substituted 2-acetamido-2-deoxy-beta-D-glucopyranosides (beta-D-GlcNAc monosaccharides 1a-3a and 1,4-linked disaccharides 1b-3b) were studied by solution NMR spectroscopy. Conformational analysis of the (6S)- and (6R)-C-methyl-substituted beta-d-GlcNAc monosaccharides indicates that the stereodefined methyl groups impose predictable conformational biases on the exocyclic C-5-C-6 bond, as determined by (1)H-(1)H and (13)C-(1)H coupling constants. Variable-temperature NMR experiments in methanol-d(4) were performed to determine DeltaDeltaH and DeltaDeltaS values derived from the two lowest energy conformers. These indicate that while the influence of 6-C-methyl substitution on conformational enthalpy is in accord with the classic principles of steric interactions, conformational preference in solution can also be strongly affected by other factors such as solvent-solute interactions and solvent reorganization.

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Year:  2005        PMID: 15624925      PMCID: PMC1851687          DOI: 10.1021/jo0485841

Source DB:  PubMed          Journal:  J Org Chem        ISSN: 0022-3263            Impact factor:   4.354


  14 in total

1.  Structural insights into the catalytic mechanism of a family 18 exo-chitinase.

Authors:  D M van Aalten; D Komander; B Synstad; S Gåseidnes; M G Peter; V G Eijsink
Journal:  Proc Natl Acad Sci U S A       Date:  2001-07-31       Impact factor: 11.205

2.  Refinement of the structure of beta-chitin.

Authors:  K H Gardner; J Blackwell
Journal:  Biopolymers       Date:  1975-08       Impact factor: 2.505

Review 3.  Bacterial resistance to aminoglycoside antibiotics.

Authors:  J Davies; G D Wright
Journal:  Trends Microbiol       Date:  1997-06       Impact factor: 17.079

4.  Evaluation of steric effects on the exocyclic conformations of 6-C-methyl-substituted 2-acetamido-2-deoxy-beta-D-glucopyranosides.

Authors:  Jihane Achkar; Isabel Sanchez-Larraza; Alexander Wei
Journal:  Carbohydr Res       Date:  2002-02-05       Impact factor: 2.104

5.  Crystal structure of geneticin bound to a bacterial 16S ribosomal RNA A site oligonucleotide.

Authors:  Quentin Vicens; Eric Westhof
Journal:  J Mol Biol       Date:  2003-02-28       Impact factor: 5.469

6.  Stereochemical Determination of Acyclic Structures Based on Carbon-Proton Spin-Coupling Constants. A Method of Configuration Analysis for Natural Products.

Authors:  Nobuaki Matsumori; Daisuke Kaneno; Michio Murata; Hideshi Nakamura; Kazuo Tachibana
Journal:  J Org Chem       Date:  1999-02-05       Impact factor: 4.354

7.  Metabolites of gentamicin-producing Micromonospora species I. Isolation and identification of metabolites.

Authors:  J Bérdy; J K Pauncz; Z M Vajna; G Horváth; J Gyimesi; I Koczka
Journal:  J Antibiot (Tokyo)       Date:  1977-11       Impact factor: 2.649

8.  Temperature-controlled regioselectivity in the reductive cleavage of p-methoxybenzylidene acetals.

Authors:  Jesús M Hernández-Torres; Jihane Achkar; Alexander Wei
Journal:  J Org Chem       Date:  2004-10-15       Impact factor: 4.354

9.  Protected glycosides and disaccharides of 2-amino-2-deoxy-D-glucopyranose by ferric chloride-catalyzed coupling.

Authors:  M Kiso; L Anderson
Journal:  Carbohydr Res       Date:  1985-02-28       Impact factor: 2.104

10.  Synthesis and conformational properties of methyl 6,6-di-C-methyl-beta-D-galactopyranoside. Probes for the combining sites of D-galactosyl-binding proteins.

Authors:  C Lough; O Hindsgaul; R U Lemieux
Journal:  Carbohydr Res       Date:  1983-08-16       Impact factor: 2.104

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