Literature DB >> 15624131

Efficient and sensitive method of DNA silver staining in polyacrylamide gels.

Lujiang Qu1, Xianyao Li, Guiqin Wu, Ning Yang.   

Abstract

DNA silver staining is widely used to detect DNA fragment in polyacrylamide gel with high sensitivity. Conventional procedures of the silver staining involve several steps, which take about 40 min to 2 h in total. To improve the efficiency of DNA silver staining, a more efficient protocol is developed in this study. The procedure comprises only four steps including impregnating, rinsing, developing, and stopping, and could be completed within 20 min. Nitric acid and ethanol in the silver-impregnation step of the new procedure eliminates the need for prior treatment of gels with a fixing solution and following rinse prior to impregnation with silver. The procedure has high sensitivity and long storage lifetime. The minimum detectable mass of DNA is 0.44 and 3.5 ng in denaturing and nondenaturing polyacrylamide gel, respectively.

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Year:  2005        PMID: 15624131     DOI: 10.1002/elps.200406177

Source DB:  PubMed          Journal:  Electrophoresis        ISSN: 0173-0835            Impact factor:   3.535


  14 in total

1.  A Fast Silver Staining Protocol Enabling Simple and Efficient Detection of SSR Markers using a Non-denaturing Polyacrylamide Gel.

Authors:  Ling Huang; Xiaohui Deng; Ronghua Li; Yanshi Xia; Guihua Bai; Kadambot H M Siddique; Peiguo Guo
Journal:  J Vis Exp       Date:  2018-04-20       Impact factor: 1.355

2.  Multiplex nested PCR for detection of Xanthomonas axonopodis pv. allii from onion seeds.

Authors:  Isabelle Robène-Soustrade; Delphine Legrand; Lionel Gagnevin; Frédéric Chiroleu; Annie Laurent; Olivier Pruvost
Journal:  Appl Environ Microbiol       Date:  2010-03-05       Impact factor: 4.792

3.  Novel Point Mutations in 3'-Untranslated Region of GATA4 Gene Are Associated with Sporadic Non-syndromic Atrial and Ventricular Septal Defects.

Authors:  Mehri Khatami; Sajedeh Ghorbani; Mojgan Rezaii Adriani; Sahar Bahaloo; Mehri Azami Naeini; Mohammad Mehdi Heidari; Mehdi Hadadzadeh
Journal:  Curr Med Sci       Date:  2021-10-15

4.  The mRNA decay factor tristetraprolin (TTP) induces senescence in human papillomavirus-transformed cervical cancer cells by targeting E6-AP ubiquitin ligase.

Authors:  Sandhya Sanduja; Vimala Kaza; Dan A Dixon
Journal:  Aging (Albany NY)       Date:  2009-09-10       Impact factor: 5.682

5.  Polymorphisms within promoter of Japanese flounder (Paralichthys olivaceus) ovary cytochrome P450-c19 (CYP19a) gene associated with reproductive traits.

Authors:  Feng He; Hai Shen Wen; Shuang Lin Dong; Bao Shi; Cai Fang Chen; Lian Shun Wang; Jun Yao; Xing Jiang Mu; Yu Guo Zhou
Journal:  Fish Physiol Biochem       Date:  2008-06-07       Impact factor: 2.794

6.  SNaPBcen: a novel and practical tool for genotyping Burkholderia cenocepacia.

Authors:  Nadia Eusebio; Carla P Coutinho; Isabel Sá-Correia; Ricardo Araujo
Journal:  J Clin Microbiol       Date:  2013-06-12       Impact factor: 5.948

7.  Applicability of anatid and galliform microsatellite markers to the genetic diversity studies of domestic geese (Anser anser domesticus) through the genotyping of the endangered zatorska breed.

Authors:  Krzysztof Andres; Ewa Kapkowska
Journal:  BMC Res Notes       Date:  2011-03-16

8.  Rapid identification of Aspergillus fumigatus within the section Fumigati.

Authors:  Rita Serrano; Leonor Gusmão; António Amorim; Ricardo Araujo
Journal:  BMC Microbiol       Date:  2011-04-21       Impact factor: 3.605

9.  Xyloglucan endotransglycosylase/hydrolase genes from a susceptible and resistant jute species show opposite expression pattern following Macrophomina phaseolina infection.

Authors:  Sazia Sharmin; Muhammad Shafiul Azam; Md Shahidul Islam; Abu Ashfaqur Sajib; Niaz Mahmood; A M Mahedi Hasan; Razib Ahmed; Kishwar Sultana; Haseena Khan
Journal:  Commun Integr Biol       Date:  2012-11-01

10.  SNaPaer: a practical single nucleotide polymorphism multiplex assay for genotyping of Pseudomonas aeruginosa.

Authors:  Nadia Eusebio; Tiago Pinheiro; Adelina A Amorim; Fernanda Gamboa; Lucília Saraiva; Leonor Gusmão; António Amorim; Ricardo Araujo
Journal:  PLoS One       Date:  2013-06-12       Impact factor: 3.240

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