Literature DB >> 1560767

Rapid surveying of DNA sequence variation in natural populations.

E P Lessa1.   

Abstract

DNA sequencing can be costly and time consuming for population studies because of the relative rarity of variation along exons. These problems can be substantially reduced by the use of the polymerase chain reaction on introns using primers from the exon region. These problems can be further reduced by the use of denaturing gradient gel electrophoresis to identify those alleles in need of sequencing.

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Year:  1992        PMID: 1560767     DOI: 10.1093/oxfordjournals.molbev.a040723

Source DB:  PubMed          Journal:  Mol Biol Evol        ISSN: 0737-4038            Impact factor:   16.240


  16 in total

1.  Discovery of intron polymorphisms in cultivated tomato using both tomato and Arabidopsis genomic information.

Authors:  Yuanyuan Wang; Jia Chen; David M Francis; Huolin Shen; Tingting Wu; Wencai Yang
Journal:  Theor Appl Genet       Date:  2010-06-16       Impact factor: 5.699

2.  Pedigree assessment using RAPD-DGGE in cereal crop species.

Authors:  I Dweikat; S Mackenzie; M Levy; H Ohm
Journal:  Theor Appl Genet       Date:  1993-01       Impact factor: 5.699

3.  Seasonal distributions of dominant 16S rRNA-defined populations in a hot spring microbial mat examined by denaturing gradient gel electrophoresis.

Authors:  M J Ferris; D M Ward
Journal:  Appl Environ Microbiol       Date:  1997-04       Impact factor: 4.792

4.  Estimating long-term mating systems using DNA sequences.

Authors:  B G Milligan
Journal:  Genetics       Date:  1996-02       Impact factor: 4.562

5.  Genome-wide discovery of DNA polymorphism in Brassica rapa.

Authors:  Soomin Park; Hee-Ju Yu; Jeong-Hwan Mun; Seung-Chan Lee
Journal:  Mol Genet Genomics       Date:  2009-12-19       Impact factor: 3.291

6.  Bioinvasions of the medfly Ceratitis capitata: source estimation using DNA sequences at multiple intron loci.

Authors:  N Davies; F X Villablanca; G K Roderick
Journal:  Genetics       Date:  1999-09       Impact factor: 4.562

7.  Effector gene vap1 based DGGE fingerprinting to assess variation within and among Heterodera schachtii populations.

Authors:  Rasha Haj Nuaima; Johannes Roeb; Johannes Hallmann; Matthias Daub; Sandra Otte; Holger Heuer
Journal:  J Nematol       Date:  2018       Impact factor: 1.402

8.  Exon-primed intron-crossing (EPIC) markers for non-model teleost fishes.

Authors:  Chenhong Li; Jean-Jack M Riethoven; Lingbo Ma
Journal:  BMC Evol Biol       Date:  2010-03-31       Impact factor: 3.260

9.  Choosing and using introns in molecular phylogenetics.

Authors:  Simon Creer
Journal:  Evol Bioinform Online       Date:  2007-06-14       Impact factor: 1.625

10.  Advances in plant gene-targeted and functional markers: a review.

Authors:  Péter Poczai; Ildikó Varga; Maarja Laos; András Cseh; Neil Bell; Jari Pt Valkonen; Jaakko Hyvönen
Journal:  Plant Methods       Date:  2013-02-13       Impact factor: 4.993

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