Literature DB >> 15599943

Description of the International Consortium For Prostate Cancer Genetics, and failure to replicate linkage of hereditary prostate cancer to 20q13.

Daniel J Schaid1, Bao Li Chang.   

Abstract

The International Consortium for Prostate Cancer Genetics (ICPCG) is an international collaborative effort to pool pedigrees with hereditary prostate cancer (PC) in order to replicate linkage findings for PC. A strength of the ICPCG is the large number of well-characterized pedigrees, allowing linkage analyses within large subsets. Given the heterogeneity and complexity of PC, the historical difficulties of synthesizing different studies reporting positive and negative linkage replication, and the use of different statistical analysis methods and different stratification criteria, the ICPCG provides a valuable resource to evaluate linkage for hereditary PC. To date, linkage of chromosome 20 (HPC20) to hereditary PC has been one of the strongest linkage signals, yet the efforts to replicate this linkage have been limited. This paper reports a linkage analysis of chromosome 20 markers for 1,234 pedigrees with multiple cases of PC ascertained through the ICPCG, and represents the most thorough attempt to confirm or refute linkage to chromosome 20. From the original 158 Mayo pedigrees in which linkage was detected, the maximum heterogeneity LOD (HLOD) score, under a recessive model, was 2.78. In contrast, for the 1,076 pedigrees not included in the original study, the maximum HLOD score (recessive model) was 0.06. Although, a few small linkage signals for chromosome 20 were found in various strata of this pooled analysis, this large study failed to replicate linkage to HPC20. This study illustrates the value of the ICPCG family collection to evaluate reported linkage signals and suggests that the HPC20 region does not make a major contribution to PC susceptibility. (c) 2004 Wiley-Liss, Inc.

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Year:  2005        PMID: 15599943     DOI: 10.1002/pros.20198

Source DB:  PubMed          Journal:  Prostate        ISSN: 0270-4137            Impact factor:   4.104


  15 in total

1.  PTP1B is an androgen receptor-regulated phosphatase that promotes the progression of prostate cancer.

Authors:  Laurent Lessard; David P Labbé; Geneviève Deblois; Louis R Bégin; Serge Hardy; Anne-Marie Mes-Masson; Fred Saad; Lloyd C Trotman; Vincent Giguère; Michel L Tremblay
Journal:  Cancer Res       Date:  2012-01-26       Impact factor: 12.701

2.  Genome-wide linkage analysis of 1,233 prostate cancer pedigrees from the International Consortium for Prostate Cancer Genetics using novel sumLINK and sumLOD analyses.

Authors:  G Bryce Christensen; Agnes B Baffoe-Bonnie; Asha George; Isaac Powell; Joan E Bailey-Wilson; John D Carpten; Graham G Giles; John L Hopper; Gianluca Severi; Dallas R English; William D Foulkes; Lovise Maehle; Pal Moller; Ros Eeles; Douglas Easton; Michael D Badzioch; Alice S Whittemore; Ingrid Oakley-Girvan; Chih-Lin Hsieh; Latchezar Dimitrov; Jianfeng Xu; Janet L Stanford; Bo Johanneson; Kerry Deutsch; Laura McIntosh; Elaine A Ostrander; Kathleen E Wiley; Sarah D Isaacs; Patrick C Walsh; William B Isaacs; Stephen N Thibodeau; Shannon K McDonnell; Scott Hebbring; Daniel J Schaid; Ethan M Lange; Kathleen A Cooney; Teuvo L J Tammela; Johanna Schleutker; Thomas Paiss; Christiane Maier; Henrik Grönberg; Fredrik Wiklund; Monica Emanuelsson; James M Farnham; Lisa A Cannon-Albright; Nicola J Camp
Journal:  Prostate       Date:  2010-05-15       Impact factor: 4.104

Review 3.  Prostate cancer susceptibility loci: finding the genes.

Authors:  Elanie A Ostrander; Bo Johannesson
Journal:  Adv Exp Med Biol       Date:  2008       Impact factor: 2.622

4.  Polygenic modeling of genome-wide association studies: an application to prostate and breast cancer.

Authors:  John S Witte; Thomas J Hoffmann
Journal:  OMICS       Date:  2011-02-24

5.  Validation of prostate cancer risk-related loci identified from genome-wide association studies using family-based association analysis: evidence from the International Consortium for Prostate Cancer Genetics (ICPCG).

Authors:  Guangfu Jin; Lingyi Lu; Kathleen A Cooney; Anna M Ray; Kimberly A Zuhlke; Ethan M Lange; Lisa A Cannon-Albright; Nicola J Camp; Craig C Teerlink; Liesel M Fitzgerald; Janet L Stanford; Kathleen E Wiley; Sarah D Isaacs; Patrick C Walsh; William D Foulkes; Graham G Giles; John L Hopper; Gianluca Severi; Ros Eeles; Doug Easton; Zsofia Kote-Jarai; Michelle Guy; Antje Rinckleb; Christiane Maier; Walther Vogel; Geraldine Cancel-Tassin; Christophe Egrot; Olivier Cussenot; Stephen N Thibodeau; Shannon K McDonnell; Daniel J Schaid; Fredrik Wiklund; Henrik Grönberg; Monica Emanuelsson; Alice S Whittemore; Ingrid Oakley-Girvan; Chih-Lin Hsieh; Tiina Wahlfors; Teuvo Tammela; Johanna Schleutker; William J Catalona; S Lilly Zheng; Elaine A Ostrander; William B Isaacs; Jianfeng Xu
Journal:  Hum Genet       Date:  2011-12-25       Impact factor: 4.132

6.  A combined genomewide linkage scan of 1,233 families for prostate cancer-susceptibility genes conducted by the international consortium for prostate cancer genetics.

Authors:  Jianfeng Xu; Latchezar Dimitrov; Bao-Li Chang; Tamara S Adams; Aubrey R Turner; Deborah A Meyers; Rosalind A Eeles; Douglas F Easton; William D Foulkes; Jacques Simard; Graham G Giles; John L Hopper; Lovise Mahle; Pal Moller; Tim Bishop; Chris Evans; Steve Edwards; Julia Meitz; Sarah Bullock; Questa Hope; Chih-Lin Hsieh; Jerry Halpern; Raymond N Balise; Ingrid Oakley-Girvan; Alice S Whittemore; Charles M Ewing; Marta Gielzak; Sarah D Isaacs; Patrick C Walsh; Kathleen E Wiley; William B Isaacs; Stephen N Thibodeau; Shannon K McDonnell; Julie M Cunningham; Katherine E Zarfas; Scott Hebbring; Daniel J Schaid; Danielle M Friedrichsen; Kerry Deutsch; Suzanne Kolb; Michael Badzioch; Gail P Jarvik; Marta Janer; Leroy Hood; Elaine A Ostrander; Janet L Stanford; Ethan M Lange; Jennifer L Beebe-Dimmer; Caroline E Mohai; Kathleen A Cooney; Tarja Ikonen; Agnes Baffoe-Bonnie; Henna Fredriksson; Mika P Matikainen; Teuvo Lj Tammela; Joan Bailey-Wilson; Johanna Schleutker; Christiane Maier; Kathleen Herkommer; Josef J Hoegel; Walther Vogel; Thomas Paiss; Fredrik Wiklund; Monica Emanuelsson; Elisabeth Stenman; Bjorn-Anders Jonsson; Henrik Gronberg; Nicola J Camp; James Farnham; Lisa A Cannon-Albright; Daniela Seminara
Journal:  Am J Hum Genet       Date:  2005-06-29       Impact factor: 11.025

Review 7.  Collaborative cancer epidemiology in the 21st century: the model of cancer consortia.

Authors:  Michael R Burgio; John P A Ioannidis; Brett M Kaminski; Eric Derycke; Scott Rogers; Muin J Khoury; Daniela Seminara
Journal:  Cancer Epidemiol Biomarkers Prev       Date:  2013-09-17       Impact factor: 4.254

8.  The sumLINK statistic for genetic linkage analysis in the presence of heterogeneity.

Authors:  G B Christensen; S Knight; N J Camp
Journal:  Genet Epidemiol       Date:  2009-11       Impact factor: 2.135

9.  Chromosomes 4 and 8 implicated in a genome wide SNP linkage scan of 762 prostate cancer families collected by the ICPCG.

Authors:  Lingyi Lu; Geraldine Cancel-Tassin; Antoine Valeri; Olivier Cussenot; Ethan M Lange; Kathleen A Cooney; James M Farnham; Nicola J Camp; Lisa A Cannon-Albright; Teuvo L J Tammela; Johanna Schleutker; Josef Hoegel; Kathleen Herkommer; Christiane Maier; Walther Vogel; Fredrik Wiklund; Monica Emanuelsson; Henrik Grönberg; Kathleen E Wiley; Sarah D Isaacs; Patrick C Walsh; Brian T Helfand; Donghui Kan; William J Catalona; Janet L Stanford; Liesel M FitzGerald; Bo Johanneson; Kerry Deutsch; Laura McIntosh; Elaine A Ostrander; Stephen N Thibodeau; Shannon K McDonnell; Scott Hebbring; Daniel J Schaid; Alice S Whittemore; Ingrid Oakley-Girvan; Chih-Lin Hsieh; Isaac Powell; Joan E Bailey-Wilson; Cheryl D Cropp; Claire Simpson; John D Carpten; Daniela Seminara; S Lilly Zheng; Jianfen Xu; Graham G Giles; Gianluca Severi; John L Hopper; Dallas R English; William D Foulkes; Lovise Maehle; Pal Moller; Michael D Badzioch; Steve Edwards; Michelle Guy; Ros Eeles; Douglas Easton; William B Isaacs
Journal:  Prostate       Date:  2011-07-11       Impact factor: 4.104

10.  Compelling evidence for a prostate cancer gene at 22q12.3 by the International Consortium for Prostate Cancer Genetics.

Authors:  Nicola J Camp; Lisa A Cannon-Albright; James M Farnham; Agnes B Baffoe-Bonnie; Asha George; Isaac Powell; Joan E Bailey-Wilson; John D Carpten; Graham G Giles; John L Hopper; Gianluca Severi; Dallas R English; William D Foulkes; Lovise Maehle; Pal Moller; Ros Eeles; Douglas Easton; Michael D Badzioch; Alice S Whittemore; Ingrid Oakley-Girvan; Chih-Lin Hsieh; Latchezar Dimitrov; Jianfeng Xu; Janet L Stanford; Bo Johanneson; Kerry Deutsch; Laura McIntosh; Elaine A Ostrander; Kathleen E Wiley; Sarah D Isaacs; Patrick C Walsh; Stephen N Thibodeau; Shannon K McDonnell; Scott Hebbring; Daniel J Schaid; Ethan M Lange; Kathleen A Cooney; Teuvo L J Tammela; Johanna Schleutker; Thomas Paiss; Christiane Maier; Henrik Grönberg; Fredrik Wiklund; Monica Emanuelsson; William B Isaacs
Journal:  Hum Mol Genet       Date:  2007-05-03       Impact factor: 6.150

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