Literature DB >> 15597570

[MIRU-VNTR genotyping of Mycobacterium tuberculosis strains from East Siberian: Beijing family versus Kilimanjaro family].

T V Medvedeva, O B Ogarkov, O M Nekipelov, I V Ushakov, E S Koz'iakova, R G Skvortsova.   

Abstract

Seventy-two M. tuberculosis strains isolated from patients in different regions of East Siberia were studied by MIRU-VNTR repeats. Phylogenetic trees of relationship between the studied strains and of those from other world regions were investigated by phylogenetic analysis, i.e. NJ, UPGMA and ML. Phylogenetic evidence is provided for the prevalence of Beijing and Beijing-like strains (71%) in the above region. Besides, there was found a group of strains (115%) with the robust genotype which was given the name of ASU (African-Siberian-Ural). A linkage between MIRU10 (5-10 repeat) and MIRU26 (single repeat) was established as a predominant ASU sign. According to preliminary results, apart from Siberia, ASU strains can be encountered in the Urals and Africa (Tanzania, Kilimanjaro genotype). MIRU-VNTR consensus of ASU for East Siberia is 22( > 6)225113233.

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Year:  2004        PMID: 15597570

Source DB:  PubMed          Journal:  Mol Gen Mikrobiol Virusol        ISSN: 0208-0613


  4 in total

1.  Molecular typing of Mycobacterium tuberculosis circulated in Moscow, Russian Federation.

Authors:  M V Afanas'ev; L N Ikryannikova; E N Il'ina; A V Kuz'min; E E Larionova; T G Smirnova; L N Chernousova; V M Govorun
Journal:  Eur J Clin Microbiol Infect Dis       Date:  2010-10-13       Impact factor: 3.267

2.  Mycobacterium tuberculosis Beijing genotype in Russia: in search of informative variable-number tandem-repeat loci.

Authors:  Igor Mokrousov; Olga Narvskaya; Anna Vyazovaya; Julie Millet; Tatiana Otten; Boris Vishnevsky; Nalin Rastogi
Journal:  J Clin Microbiol       Date:  2008-08-27       Impact factor: 5.948

3.  Primary antimicrobial resistance among Mycobacterium tuberculosis isolates from HIV seropositive and HIV seronegative patients in Dar es Salaam Tanzania.

Authors:  Willy Urassa; Ferdinand Mugusi; Eduardo Villamor; Gernard Msamanga; Candida Moshiro; Ronald Bosch; Elmar Saathoff; Wafaie Fawzi
Journal:  BMC Res Notes       Date:  2008-07-31

4.  Bi-logistic model for disease dynamics caused by Mycobacterium tuberculosis in Russia.

Authors:  Anastasia I Lavrova; Eugene B Postnikov; Olga A Manicheva; Boris I Vishnevsky
Journal:  R Soc Open Sci       Date:  2017-09-13       Impact factor: 2.963

  4 in total

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