Literature DB >> 1559686

Sample size requirements for addressing the population genetic issues of forensic use of DNA typing.

R Chakraborty1.   

Abstract

DNA typing offers a unique opportunity to identify individuals for medical and forensic purposes. Probabilistic inference regarding the chance occurrence of a match between the DNA type of an evidentiary sample and that of an accused suspect, however, requires reliable estimation of genotype and allele frequencies in the population. Although population-based data on DNA typing at several hypervariable loci are being accumulated at various laboratories, a rigorous treatment of the sample size needed for such purposes has not been made from population genetic considerations. It is shown here that the loci that are potentially most useful for forensic identification of individuals have the intrinsic property that they involve a large number of segregating alleles, and a great majority of these alleles are rare. As a consequence, because of the large number of possible genotypes at the hypervariable loci that offer the maximum potential for individualization, the sample size needed to observe all possible genotypes in a sample is large. In fact, the size is so large that even if such a huge number of individuals could be sampled, it could not be guaranteed that such a sample was drawn from a single homogeneous population. Therefore adequate estimation of genotypic probabilities must be based on allele frequencies, and the sample size needed to represent all possible alleles is far more reasonable. Further economization of sample size is possible if one wants to have representation of only the frequent alleles in the sample, so that the rare allele frequencies can be approximated by an upper bound for forensic applications.

Mesh:

Year:  1992        PMID: 1559686

Source DB:  PubMed          Journal:  Hum Biol        ISSN: 0018-7143            Impact factor:   0.553


  19 in total

Review 1.  Population genetics in the forensic DNA debate.

Authors:  B S Weir
Journal:  Proc Natl Acad Sci U S A       Date:  1992-12-15       Impact factor: 11.205

2.  Characteristics of polymorphism at a VNTR locus 3' to the apolipoprotein B gene in five human populations.

Authors:  R Deka; R Chakraborty; S DeCroo; F Rothhammer; S A Barton; R E Ferrell
Journal:  Am J Hum Genet       Date:  1992-12       Impact factor: 11.025

3.  Genetic variation at 15 polymorphic, autosomal, short tandem repeat loci of two Hungarian populations in Transylvania, Romania.

Authors:  Szabolcs József Demeter; Beatrice Kelemen; Gyöngyi Székely; Octavian Popescu
Journal:  Croat Med J       Date:  2010-12       Impact factor: 1.351

4.  Allele frequencies for 15 short tandem repeat loci in representative sample of Croatian population.

Authors:  Petar Projić; Vedrana Skaro; Ivana Samija; Naris Pojskić; Adaleta Durmić-Pasić; Lejla Kovacević; Narcisa Bakal; Dragan Primorac; Damir Marjanović
Journal:  Croat Med J       Date:  2007-08       Impact factor: 1.351

5.  Estimating minimum allele frequencies for DNA profile frequency estimates for PCR-based loci.

Authors:  B Budowle; K L Monson; R Chakraborty
Journal:  Int J Legal Med       Date:  1996       Impact factor: 2.686

6.  Evaluation of InnoTyper® 21 in a sample of Rio de Janeiro population as an alternative forensic panel.

Authors:  R S Moura-Neto; I C T Mello; R Silva; A P C Maette; C G Bottino; A Woerner; J King; F Wendt; B Budowle
Journal:  Int J Legal Med       Date:  2017-07-26       Impact factor: 2.686

7.  Forensic DNA profiling and database.

Authors:  S Panneerchelvam; M N Norazmi
Journal:  Malays J Med Sci       Date:  2003-07

8.  Identification of repeat sequence heterogeneity at the polymorphic short tandem repeat locus HUMTH01[AATG]n and reassignment of alleles in population analysis by using a locus-specific allelic ladder.

Authors:  C Puers; H A Hammond; L Jin; C T Caskey; J W Schumm
Journal:  Am J Hum Genet       Date:  1993-10       Impact factor: 11.025

9.  Intraclass and interclass correlations of allele sizes within and between loci in DNA typing data.

Authors:  R Chakraborty; M R Srinivasan; M de Andrade
Journal:  Genetics       Date:  1993-02       Impact factor: 4.562

10.  Sequence-based U.S. population data for 27 autosomal STR loci.

Authors:  Katherine Butler Gettings; Lisa A Borsuk; Carolyn R Steffen; Kevin M Kiesler; Peter M Vallone
Journal:  Forensic Sci Int Genet       Date:  2018-07-19       Impact factor: 4.882

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