Literature DB >> 15595869

Electrokinetically controlled DNA hybridization microfluidic chip enabling rapid target analysis.

David Erickson1, Xuezhu Liu, Ulrich Krull, Dongqing Li.   

Abstract

Biosensors and more specifically biochips exploit the interactions between a target analyte and an immobilized biological recognition element to produce a measurable signal. Systems based on surface nucleic acid hybridization, such as microarrays, are particularly attractive due to the high degree of selectivity in the binding interactions. One of the drawbacks of this reaction is the relatively long time required for complete hybridization to occur, which is often the result of diffusion-limited reaction kinetics. In this work, an electrokinetically controlled DNA hybridization microfluidic chip will be introduced. The electrokinetic delivery technique provides the ability to dispense controlled samples of nanoliter volumes directly to the hybridization array (thereby increasing the reaction rate) and rapidly remove nonspecific adsorption, enabling the hybridization, washing, and scanning procedures to be conducted simultaneously. The result is that all processes from sample dispensing to hybridization detection can be completed in as little as 5 min. The chip also demonstrates an efficient hybridization scheme in which the probe saturation level is reached very rapidly as the targets are transported over the immobilized probe site enabling quantitative analysis of the sample concentration. Detection levels as low as 50 pM have been recorded using an epifluorescence microscope.

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Year:  2004        PMID: 15595869     DOI: 10.1021/ac049396d

Source DB:  PubMed          Journal:  Anal Chem        ISSN: 0003-2700            Impact factor:   6.986


  17 in total

1.  Kinetics of multiplex hybridization: mechanisms and implications.

Authors:  J Bishop; A M Chagovetz; S Blair
Journal:  Biophys J       Date:  2007-11-09       Impact factor: 4.033

2.  Three-dimensional continuous particle focusing in a microfluidic channel via standing surface acoustic waves (SSAW).

Authors:  Jinjie Shi; Shahrzad Yazdi; Sz-Chin Steven Lin; Xiaoyun Ding; I-Kao Chiang; Kendra Sharp; Tony Jun Huang
Journal:  Lab Chip       Date:  2011-06-27       Impact factor: 6.799

3.  Dynamic radial positioning of a hydrodynamically focused particle stream enabled by a three-dimensional microfluidic nozzle.

Authors:  C G Hebert; S J R Staton; T Q Hudson; S J Hart; C Lopez-Mariscal; A Terray
Journal:  Biomicrofluidics       Date:  2015-03-24       Impact factor: 2.800

Review 4.  Advances in microfluidic materials, functions, integration, and applications.

Authors:  Pamela N Nge; Chad I Rogers; Adam T Woolley
Journal:  Chem Rev       Date:  2013-02-14       Impact factor: 60.622

5.  BIOPHYSICAL PROPERTIES OF NUCLEIC ACIDS AT SURFACES RELEVANT TO MICROARRAY PERFORMANCE.

Authors:  Archana N Rao; David W Grainger
Journal:  Biomater Sci       Date:  2014-04-01       Impact factor: 6.843

6.  Eliminating Size-Associated Diffusion Constraints for Rapid On-Surface Bioassays with Nanoparticle Probes.

Authors:  Junwei Li; Pavel Zrazhevskiy; Xiaohu Gao
Journal:  Small       Date:  2016-01-08       Impact factor: 13.281

7.  Real-time fluorescent image analysis of DNA spot hybridization kinetics to assess microarray spot heterogeneity.

Authors:  Archana N Rao; Christopher K Rodesch; David W Grainger
Journal:  Anal Chem       Date:  2012-10-29       Impact factor: 6.986

8.  Modular microfluidic system fabricated in thermoplastics for the strain-specific detection of bacterial pathogens.

Authors:  Yi-Wen Chen; Hong Wang; Mateusz Hupert; Makgorzata Witek; Udara Dharmasiri; Maneesh R Pingle; Francis Barany; Steven A Soper
Journal:  Lab Chip       Date:  2012-08-02       Impact factor: 6.799

Review 9.  Biosensing with quantum dots: a microfluidic approach.

Authors:  Charles H Vannoy; Anthony J Tavares; M Omair Noor; Uvaraj Uddayasankar; Ulrich J Krull
Journal:  Sensors (Basel)       Date:  2011-10-18       Impact factor: 3.576

10.  Electrokinetic stringency control in self-assembled monolayer-based biosensors for multiplex urinary tract infection diagnosis.

Authors:  Tingting Liu; Mandy L Y Sin; Jeff D Pyne; Vincent Gau; Joseph C Liao; Pak Kin Wong
Journal:  Nanomedicine       Date:  2013-07-24       Impact factor: 5.307

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