Literature DB >> 15592896

AIPAR: ab initio parametrization of intermolecular potentials for computer simulations.

Marcelo Z Hernandes1, Ricardo L Longo.   

Abstract

An unambiguous, fully ab initio and automated technique denoted AIPAR ("ab initio parametrization") implemented in the SJBR program has been proposed to yield intermolecular interaction potentials between polar molecules and water. The AIPAR procedure has been applied to several organic molecules covering a wide range of structure and functional groups, namely methanol, acetone (propanone), methanethiol (methyl mercaptan), imidazole (1,3-diazole), oxazole and furan. The AIPAR-derived sets of parameters compare well with the empirical OPLS ones, mainly when the all-atoms model is employed in the OPLS procedure. Monte Carlo simulations were performed for an aqueous solution of methanol and for an equimolar binary mixture methanol-water using the AIPAR and OPLS parameters. The thermodynamic and geometric results obtained with the parameters obtained with the AIPAR procedure compare favorably with the OPLS simulations, even for the binary mixture, demonstrating the precision, robustness and transferability of the parameters obtained with the AIPAR procedure.

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Year:  2004        PMID: 15592896     DOI: 10.1007/s00894-004-0222-9

Source DB:  PubMed          Journal:  J Mol Model        ISSN: 0948-5023            Impact factor:   1.810


  3 in total

1.  Analytical potentials from "ab initio" computations for the interaction between biomolecules. 2. Water with the bases of DNA.

Authors:  R Scordamaglia; F Cavallone; E Clementi
Journal:  J Am Chem Soc       Date:  1977-08-17       Impact factor: 15.419

2.  Analytical potentials from "ab initio" computations for the interaction between biomolecules. 1. Water with amino acids.

Authors:  E Clementi; F Cavallone; R Scordamaglia
Journal:  J Am Chem Soc       Date:  1977-08-17       Impact factor: 15.419

3.  Analytical potentials from "ab initio" computations for the interaction between biomolecules. 3. Reliability and transferability of the pair potentials.

Authors:  G Bolis; E Clementi
Journal:  J Am Chem Soc       Date:  1977-08-17       Impact factor: 15.419

  3 in total
  1 in total

1.  Prediction on miscibility of silicone and gasoline components by Monte Carlo simulation.

Authors:  Qingyin Li; Dong Liu; Linhua Song; Pingping Wu; Zifeng Yan
Journal:  J Mol Model       Date:  2014-05-10       Impact factor: 1.810

  1 in total

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