Literature DB >> 15591049

Serum response factor, an enriched cardiac mesoderm obligatory factor, is a downstream gene target for Tbx genes.

Matthew R Barron1, Narasimhaswamy S Belaguli, Shu Xiang Zhang, Mimi Trinh, Dinaker Iyer, Xanthi Merlo, John W Lough, Michael S Parmacek, Benoit G Bruneau, Robert J Schwartz.   

Abstract

We tested the idea that T-box factors direct serum response factor (SRF) gene activity early in development. Analysis of SRF-LacZ "knock-in" mice showed highly restricted expression in early embryonic cardiac and skeletal muscle mesoderm and neuroectoderm. Examination of the SRF gene for regulatory regions by linking the promoter and 5'-flanking sequences, up to 5.5 kb, failed to target LacZ transgene activity to the heart and the tail pre-somitic mesenchyme. However, linkage of a minimal SRF promoter with the SRF 3'-untranslated region (UTR), inundated with multimeric T-box binding sites (TBEs), restored robust reporter gene activity to embryonic heart and tail. Finer dissection of the 3'-UTR to a small cluster of TBEs also stimulated transgene activity in the cardiac forming region and the tail, however, when the TBEs contained within these DNA sequences were mutated, preventing Tbx binding, transgene activity was lost. Tbx2, Tbx5, and the cardiac-enriched MYST family histone acetyltransferase TIP60, were observed to be mutual interactive cofactors through the TIP60 zinc finger and the T-box of the Tbx factors. In SRF-null ES cells, TIP60, Tbx2, and Tbx5 were sufficient to stimulate co-transfected SRF reporter activity, however this activity required the presence of the SRF 3'-UTR. SRF gene transactivation was blocked by two distinct TIP60 mutants, in which either the histone acetyltransferase domain was inactivated or the Zn finger-protein binding domain was excised. Our study supports the idea that SRF embryonic cardiac gene expression is dependent upon the SRF 3'-UTR enhancer, Tbx2, Tbx5, and TIP60 histone acetyltransferase activity.

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Year:  2004        PMID: 15591049     DOI: 10.1074/jbc.M412408200

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  14 in total

1.  Nucleosome recognition by the Piccolo NuA4 histone acetyltransferase complex.

Authors:  Christopher E Berndsen; William Selleck; Steven J McBryant; Jeffrey C Hansen; Song Tan; John M Denu
Journal:  Biochemistry       Date:  2007-02-03       Impact factor: 3.162

2.  Histone deacetylase 3 modulates Tbx5 activity to regulate early cardiogenesis.

Authors:  Sara L Lewandowski; Harish P Janardhan; Kevin M Smee; Marcos Bachman; Zheng Sun; Mitchell A Lazar; Chinmay M Trivedi
Journal:  Hum Mol Genet       Date:  2014-02-23       Impact factor: 6.150

3.  Identification and expression of SRF targeted by miR-133a during early development of Paralichthys olivaceus.

Authors:  Yanfang Su; Yuanshuai Fu; Hongmei Zhang; Zhiyi Shi; Junling Zhang; Lina Gao
Journal:  Fish Physiol Biochem       Date:  2015-06-03       Impact factor: 2.794

Review 4.  Elucidating the mechanisms of transcription regulation during heart development by next-generation sequencing.

Authors:  Keisuke Nimura; Yasufumi Kaneda
Journal:  J Hum Genet       Date:  2015-07-23       Impact factor: 3.172

5.  Myocardin regulates BMP10 expression and is required for heart development.

Authors:  Jianhe Huang; John Elicker; Nina Bowens; Xi Liu; Lan Cheng; Thomas P Cappola; Xiaohong Zhu; Michael S Parmacek
Journal:  J Clin Invest       Date:  2012-09-17       Impact factor: 14.808

6.  Single-nucleus chromatin accessibility profiling highlights regulatory mechanisms of coronary artery disease risk.

Authors:  Adam W Turner; Shengen Shawn Hu; Jose Verdezoto Mosquera; Wei Feng Ma; Chani J Hodonsky; Doris Wong; Gaëlle Auguste; Yipei Song; Katia Sol-Church; Emily Farber; Soumya Kundu; Anshul Kundaje; Nicolas G Lopez; Lijiang Ma; Saikat Kumar B Ghosh; Suna Onengut-Gumuscu; Euan A Ashley; Thomas Quertermous; Aloke V Finn; Nicholas J Leeper; Jason C Kovacic; Johan L M Björkegren; Chongzhi Zang; Clint L Miller
Journal:  Nat Genet       Date:  2022-05-19       Impact factor: 41.307

Review 7.  T-box factors determine cardiac design.

Authors:  W M H Hoogaars; P Barnett; A F M Moorman; V M Christoffels
Journal:  Cell Mol Life Sci       Date:  2007-03       Impact factor: 9.261

Review 8.  Serum response factor micromanaging cardiogenesis.

Authors:  Zhivy Niu; Ankang Li; Shu X Zhang; Robert J Schwartz
Journal:  Curr Opin Cell Biol       Date:  2007-11-26       Impact factor: 8.382

9.  Serum response factor orchestrates nascent sarcomerogenesis and silences the biomineralization gene program in the heart.

Authors:  Zhiyv Niu; Dinakar Iyer; Simon J Conway; James F Martin; Kathryn Ivey; Deepak Srivastava; Alfred Nordheim; Robert J Schwartz
Journal:  Proc Natl Acad Sci U S A       Date:  2008-11-12       Impact factor: 11.205

10.  cis-Decoder discovers constellations of conserved DNA sequences shared among tissue-specific enhancers.

Authors:  Thomas Brody; Wayne Rasband; Kevin Baler; Alexander Kuzin; Mukta Kundu; Ward F Odenwald
Journal:  Genome Biol       Date:  2007       Impact factor: 13.583

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