Literature DB >> 15585529

RBT--a tool for building refined Buneman trees.

Søren Besenbacher1, Thomas Mailund, Lasse Westh-Nielsen, Christian N S Pedersen.   

Abstract

SUMMARY: We have developed a tool implementing an efficient algorithm for refined Buneman tree reconstruction. The algorithm--which has the same complexity as the neighbour-joining method and the (plain) Buneman tree construction--enables refined Buneman tree reconstruction on large taxa sets. AVAILABILITY: The source code for RBT, written in Java, is available under the GNU Public License (GPL) at http://www.birc.dk/Software/RBT CONTACT: besen@daimi.au.dk.

Mesh:

Year:  2004        PMID: 15585529     DOI: 10.1093/bioinformatics/bti195

Source DB:  PubMed          Journal:  Bioinformatics        ISSN: 1367-4803            Impact factor:   6.937


  1 in total

1.  Fast calculation of the quartet distance between trees of arbitrary degrees.

Authors:  Chris Christiansen; Thomas Mailund; Christian N S Pedersen; Martin Randers; Martin Stig Stissing
Journal:  Algorithms Mol Biol       Date:  2006-09-25       Impact factor: 1.405

  1 in total

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