Literature DB >> 15584865

NMR-based techniques in the hit identification and optimisation processes.

Maurizio Pellecchia1, Barbara Becattini, Kevin J Crowell, Roberto Fattorusso, Martino Forino, Marco Fragai, Dawoon Jung, Tomas Mustelin, Lutz Tautz.   

Abstract

In this review, the use of general NMR spectroscopy techniques to detect ligand binding and to monitor enzyme kinetics and inhibition, which appear particularly useful in hit identification and validation, is reiterated. Furthermore, the use of NMR-based strategies for lead optimisations that are based on either iterative derivatisations of an initial core structure or on linking fragments that occupy adjacent pockets in the target's binding site will also be described. Several recent examples will be reported and the use of these techniques in cases when the three dimensional structure of the target protein is known will be discussed.

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Year:  2004        PMID: 15584865     DOI: 10.1517/14728222.8.6.597

Source DB:  PubMed          Journal:  Expert Opin Ther Targets        ISSN: 1472-8222            Impact factor:   6.902


  15 in total

1.  NMR-based design and evaluation of novel bidentate inhibitors of the protein tyrosine phosphatase YopH.

Authors:  Marilisa Leone; Elisa Barile; Jesus Vazquez; Angel Mei; Donald Guiney; Russel Dahl; Maurizio Pellecchia
Journal:  Chem Biol Drug Des       Date:  2010-04-28       Impact factor: 2.817

2.  Targeting zinc finger domains with small molecules: solution structure and binding studies of the RanBP2-type zinc finger of RBM5.

Authors:  Biancamaria Farina; Roberto Fattorusso; Maurizio Pellecchia
Journal:  Chembiochem       Date:  2011-12-16       Impact factor: 3.164

3.  Development of molecular probes for second-site screening and design of protein tyrosine phosphatase inhibitors.

Authors:  Jesus Vazquez; Lutz Tautz; Jennifer J Ryan; Kristiina Vuori; Tomas Mustelin; Maurizio Pellecchia
Journal:  J Med Chem       Date:  2007-03-30       Impact factor: 7.446

Review 4.  Application of NMR and molecular docking in structure-based drug discovery.

Authors:  Jaime L Stark; Robert Powers
Journal:  Top Curr Chem       Date:  2012

5.  Structure-activity relationships by interligand NOE-based design and synthesis of antiapoptotic compounds targeting Bid.

Authors:  Barbara Becattini; Carsten Culmsee; Marilisa Leone; Dayong Zhai; Xiyun Zhang; Kevin J Crowell; Michele F Rega; Stefan Landshamer; John C Reed; Nikolaus Plesnila; Maurizio Pellecchia
Journal:  Proc Natl Acad Sci U S A       Date:  2006-08-04       Impact factor: 11.205

6.  Leveraging structure determination with fragment screening for infectious disease drug targets: MECP synthase from Burkholderia pseudomallei.

Authors:  Darren W Begley; Robert C Hartley; Douglas R Davies; Thomas E Edwards; Jess T Leonard; Jan Abendroth; Courtney A Burris; Janhavi Bhandari; Peter J Myler; Bart L Staker; Lance J Stewart
Journal:  J Struct Funct Genomics       Date:  2011-02-26

7.  SAR by interligand nuclear overhauser effects (ILOEs) based discovery of acylsulfonamide compounds active against Bcl-x(L) and Mcl-1.

Authors:  Michele F Rega; Bainan Wu; Jun Wei; Ziming Zhang; Jason F Cellitti; Maurizio Pellecchia
Journal:  J Med Chem       Date:  2011-08-04       Impact factor: 7.446

Review 8.  Perspectives on NMR in drug discovery: a technique comes of age.

Authors:  Maurizio Pellecchia; Ivano Bertini; David Cowburn; Claudio Dalvit; Ernest Giralt; Wolfgang Jahnke; Thomas L James; Steve W Homans; Horst Kessler; Claudio Luchinat; Bernd Meyer; Hartmut Oschkinat; Jeff Peng; Harald Schwalbe; Gregg Siegal
Journal:  Nat Rev Drug Discov       Date:  2008-09       Impact factor: 84.694

9.  High-Throughput Screening (HTS) by NMR Guided Identification of Novel Agents Targeting the Protein Docking Domain of YopH.

Authors:  Angel Bottini; Bainan Wu; Elisa Barile; Surya K De; Marilisa Leone; Maurizio Pellecchia
Journal:  ChemMedChem       Date:  2015-11-23       Impact factor: 3.466

10.  HTS by NMR of combinatorial libraries: a fragment-based approach to ligand discovery.

Authors:  Bainan Wu; Ziming Zhang; Roberta Noberini; Elisa Barile; Marc Giulianotti; Clemencia Pinilla; Richard A Houghten; Elena B Pasquale; Maurizio Pellecchia
Journal:  Chem Biol       Date:  2013-01-24
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