Literature DB >> 15583327

Rapid discrimination between human immunodeficiency virus type 2 groups A and B by real-time PCR.

Jean-Christophe Plantier1, Marie Gueudin, Fabienne de Oliveira, Florence Damond, Véronique Lemée, Françoise Brun-Vézinet, François Simon.   

Abstract

We studied the feasibility of genotyping human immunodeficiency virus (HIV) type 2 groups A and B by real-time PCR. Two group-specific PCRs were developed. Real-time genotyping of 22 samples of genotype A, 10 samples of genotype B, and the isolate of new group H were compared to genotyping by sequencing and phylogeny. The group-specific PCRs specifically identified 84.3% of group A or B samples; isolate H was not detected. This method allowed rapid and specific discrimination between HIV-2 groups A and B and could be a useful tool for molecular epidemiological studies.

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Year:  2004        PMID： 15583327      PMCID： PMC535281          DOI： 10.1128/JCM.42.12.5866-5870.2004

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN： 0095-1137            Impact factor:   5.948


  26 in total

1.  HIV-2 subtype circulating in India (south).

Authors:  Rajesh Kannangai; Ramachandran V Shaji; Sandeep Ramalingam; Mary V Jesudason; Oriapadickal C Abraham; Renu George; Arvindh P Shanmugam; David H Schwartz; Gopalan Sridharan
Journal:  J Acquir Immune Defic Syndr       Date:  2003-06-01       Impact factor: 3.731

2.  Introduction of human immunodeficiency virus type 2 infection in the Philippines.

Authors:  Prisca Susan Leaño; Seiji Kageyama; Adelfa Espantaleon; Janak Maniar; Masaomi Iwasaki; Dattatray Saple; Namiko Yoshihara; Takashi Kurimura; Dorothy May Agdamag
Journal:  J Clin Microbiol       Date:  2003-01       Impact factor: 5.948

3.  Human immunodeficiency virus type 2 infection in the United States. Epidemiology, diagnosis, and public health implications.

Authors:  T R O'Brien; J R George; S D Holmberg
Journal:  JAMA       Date:  1992-05-27       Impact factor: 56.272

4.  Evidence of HIV-2 infection in Equatorial Guinea (central Africa): partial genetic analysis of a B subtype virus.

Authors:  A Heredia; A Vallejo; V Soriano; M Gutierrez; S Puente; J S Epstein; I K Hewlett
Journal:  AIDS Res Hum Retroviruses       Date:  1997-03-20       Impact factor: 2.205

5.  Isolation of a new human retrovirus from West African patients with AIDS.

Authors:  F Clavel; D Guétard; F Brun-Vézinet; S Chamaret; M A Rey; M O Santos-Ferreira; A G Laurent; C Dauguet; C Katlama; C Rouzioux
Journal:  Science       Date:  1986-07-18       Impact factor: 47.728

6.  Genetic diversity and HIV detection by polymerase chain reaction.

Authors:  I Loussert-Ajaka; D Descamps; F Simon; F Brun-Vézinet; M Ekwalanga; S Saragosti
Journal:  Lancet       Date:  1995-09-30       Impact factor: 79.321

7.  Serological evidence for virus related to simian T-lymphotropic retrovirus III in residents of west Africa.

Authors:  F Barin; S M'Boup; F Denis; P Kanki; J S Allan; T H Lee; M Essex
Journal:  Lancet       Date:  1985 Dec 21-28       Impact factor: 79.321

8.  Epidemiological and molecular characteristics of HIV infection in Gabon, 1986-1994.

Authors:  E Delaporte; W Janssens; M Peeters; A Buvé; G Dibanga; J L Perret; V Ditsambou; J R Mba; M C Courbot; A Georges; A Bourgeois; B Samb; D Henzel; L Heyndrickx; K Fransen; G van der Groen; B Larouzé
Journal:  AIDS       Date:  1996-07       Impact factor: 4.177

9.  Genetic diversity of human immunodeficiency virus type 2: evidence for distinct sequence subtypes with differences in virus biology.

Authors:  F Gao; L Yue; D L Robertson; S C Hill; H Hui; R J Biggar; A E Neequaye; T M Whelan; D D Ho; G M Shaw
Journal:  J Virol       Date:  1994-11       Impact factor: 5.103

10.  HIV-1 and HIV-2 infections in a high-risk population in Bombay, India: evidence for the spread of HIV-2 and presence of a divergent HIV-1 subtype.

Authors:  A Pfützner; U Dietrich; U von Eichel; H von Briesen; H D Brede; J K Maniar; H Rübsamen-Waigmann
Journal:  J Acquir Immune Defic Syndr (1988)       Date:  1992-10
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  5 in total

1.  New sensitive one-step real-time duplex PCR method for group A and B HIV-2 RNA load.

Authors:  Véronique Avettand-Fenoel; Florence Damond; Marie Gueudin; Sophie Matheron; Adeline Mélard; Gilles Collin; Diane Descamps; Marie-Laure Chaix; Christine Rouzioux; Jean-Christophe Plantier
Journal:  J Clin Microbiol       Date:  2014-06-11       Impact factor: 5.948

2.  Genotyping measles virus by real-time amplification refractory mutation system PCR represents a rapid approach for measles outbreak investigations.

Authors:  Diane Waku-Kouomou; Amal Alla; Bariza Blanquier; Damien Jeantet; Hayat Caidi; Ahmed Rguig; François Freymuth; Fabian T Wild
Journal:  J Clin Microbiol       Date:  2006-02       Impact factor: 5.948

3.  The origins of HIV and implications for the global epidemic.

Authors:  Fran Van Heuverswyn; Martine Peeters
Journal:  Curr Infect Dis Rep       Date:  2007-07       Impact factor: 3.725

4.  Drug resistance mutations and viral load in human immunodeficiency virus type 2 and dual HIV-1/HIV-2 infected patients in Ghana.

Authors:  Christopher Z Abana; Kwamena W C Sagoe; Evelyn Y Bonney; Edward K Maina; Ishmael D Aziati; Esinam Agbosu; Gifty Mawuli; Linda M Styer; Koichi Ishikawa; James A M Brandful; William K Ampofo
Journal:  Medicine (Baltimore)       Date:  2019-02       Impact factor: 1.817

Review 5.  Detection and monitoring of virus infections by real-time PCR.

Authors:  F Watzinger; K Ebner; T Lion
Journal:  Mol Aspects Med       Date:  2006-02-14
  5 in total

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