Literature DB >> 15576932

In situ assay for analyzing the chromatin binding of proteins in fission yeast.

Stephen E Kearsey1, Lydia Brimage, Mandana Namdar, Emma Ralph, Xiaowen Yang.   

Abstract

An in situ technique for studying the chromatin binding of proteins in single fission yeast cells (Schizosaccharomyces pombe) is described. Cells are permeabilized by enzymatic digestion and extracted with a detergent-containing buffer. This procedure removes soluble proteins, but proteins that are bound to insoluble cell structures such as chromatin are retained, and overall cell morphology is maintained. Extraction of proteins is monitored by fluorescence microscopy, either using fluorescently tagged proteins or by indirect immunofluorescence. This method allows the chromatin association of proteins to be correlated with other cell cycle events without the need for cell synchronization.

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Year:  2005        PMID: 15576932     DOI: 10.1385/1-59259-857-9:181

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  9 in total

1.  GINS inactivation phenotypes reveal two pathways for chromatin association of replicative alpha and epsilon DNA polymerases in fission yeast.

Authors:  Chen Chun Pai; Ignacio García; Shao Win Wang; Sue Cotterill; Stuart A Macneill; Stephen E Kearsey
Journal:  Mol Biol Cell       Date:  2008-12-24       Impact factor: 4.138

2.  DNA damage induces Cdt1 proteolysis in fission yeast through a pathway dependent on Cdt2 and Ddb1.

Authors:  Emma Ralph; Erik Boye; Stephen E Kearsey
Journal:  EMBO Rep       Date:  2006-10-13       Impact factor: 8.807

3.  Laser microsurgery provides evidence for merotelic kinetochore attachments in fission yeast cells lacking Pcs1 or Clr4.

Authors:  Cornelia Rumpf; Lubos Cipak; Alexander Schleiffer; Alison Pidoux; Karl Mechtler; Iva M Tolić-Nørrelykke; Juraj Gregan
Journal:  Cell Cycle       Date:  2010-10-03       Impact factor: 4.534

4.  Nuclear distribution and chromatin association of DNA polymerase alpha-primase is affected by TEV protease cleavage of Cdc23 (Mcm10) in fission yeast.

Authors:  Xiaowen Yang; Juraj Gregan; Karola Lindner; Hedi Young; Stephen E Kearsey
Journal:  BMC Mol Biol       Date:  2005-06-07       Impact factor: 2.946

5.  Mediator tail subunits can form amyloid-like aggregates in vivo and affect stress response in yeast.

Authors:  Xuefeng Zhu; Lihua Chen; Jonas O P Carlsten; Qian Liu; Junsheng Yang; Beidong Liu; Claes M Gustafsson
Journal:  Nucleic Acids Res       Date:  2015-07-02       Impact factor: 16.971

6.  Development of novel cellular histone-binding and chromatin-displacement assays for bromodomain drug discovery.

Authors:  Yanai Zhan; Maria Kost-Alimova; Xi Shi; Elisabetta Leo; Jennifer P Bardenhagen; Hannah E Shepard; Srikanth Appikonda; Bhavatarini Vangamudi; Shuping Zhao; Trang N Tieu; Shiming Jiang; Timothy P Heffernan; Joseph R Marszalek; Carlo Toniatti; Giulio Draetta; Jessica Tyler; Michelle Barton; Philip Jones; Wylie S Palmer; Mary K Geck Do; Jannik N Andersen
Journal:  Epigenetics Chromatin       Date:  2015-09-21       Impact factor: 4.954

7.  MCM-GINS and MCM-MCM interactions in vivo visualised by bimolecular fluorescence complementation in fission yeast.

Authors:  Gökhan Akman; Stuart A MacNeill
Journal:  BMC Cell Biol       Date:  2009-02-19       Impact factor: 4.241

8.  Expression of the cancer-associated DNA polymerase ε P286R in fission yeast leads to translesion synthesis polymerase dependent hypermutation and defective DNA replication.

Authors:  Ignacio Soriano; Enrique Vazquez; Nagore De Leon; Sibyl Bertrand; Ellen Heitzer; Sophia Toumazou; Zhihan Bo; Claire Palles; Chen-Chun Pai; Timothy C Humphrey; Ian Tomlinson; Sue Cotterill; Stephen E Kearsey
Journal:  PLoS Genet       Date:  2021-07-06       Impact factor: 5.917

9.  Sequential steps in DNA replication are inhibited to ensure reduction of ploidy in meiosis.

Authors:  Hui Hua; Mandana Namdar; Olivier Ganier; Juraj Gregan; Marcel Méchali; Stephen E Kearsey
Journal:  Mol Biol Cell       Date:  2013-01-09       Impact factor: 4.138

  9 in total

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